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Template:STRUCTURE 1kyo
From Proteopedia
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| - | {{ | + | {{StructureD |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1kyo, resolution 2.97Å (<scene name='initialview01'>initial scene</scene>) | + | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1kyo, resolution 2.97Å (<scene name='initialview01'>initial scene</scene>)}}} |
| - | + | |LIGAND= <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SMA:STIGMATELLIN+A'>SMA</scene> | |
| - | |LIGAND= <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM | + | |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ubiquinol--cytochrome-c_reductase Ubiquinol--cytochrome-c reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.2.2 1.10.2.2] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ubiquinol--cytochrome-c_reductase Ubiquinol--cytochrome-c reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.2.2 1.10.2.2] </span> | ||
| - | |GENE= | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07686 V-set], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00099 IGv], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1290 QcrB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00284 Cytochrome_b_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00290 cytochrome_b_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02271 UCR_14kD], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05365 UCR_UQCRX_QCR9], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00675 Peptidase_M16], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05193 Peptidase_M16_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3474 COG3474], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02939 UcrQ], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0612 PqqL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2857 CYT1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02167 Cytochrom_C1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03470 Rieske_cytochrome_bc1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02921 UCR_TM], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0723 QcrA]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07686 V-set], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00099 IGv], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1290 QcrB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00284 Cytochrome_b_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00290 cytochrome_b_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02271 UCR_14kD], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05365 UCR_UQCRX_QCR9], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00675 Peptidase_M16], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05193 Peptidase_M16_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3474 COG3474], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02939 UcrQ], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0612 PqqL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2857 CYT1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02167 Cytochrom_C1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03470 Rieske_cytochrome_bc1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02921 UCR_TM], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0723 QcrA]</span> | ||
|RELATEDENTRY=[[1ezv|1ezv]], [[1kb9|1kb9]] | |RELATEDENTRY=[[1ezv|1ezv]], [[1kb9|1kb9]] | ||
| + | |NONSTDRES=<scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kyo OCA], [http://www.ebi.ac.uk/pdbsum/1kyo PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kyo RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kyo OCA], [http://www.ebi.ac.uk/pdbsum/1kyo PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kyo RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0004222 | text = metalloendopeptidase activity}}{{GO|id=GO:0008121 | text = ubiquinol-cytochrome-c reductase activity}}{{GO|id=GO:0005506 | text = iron ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0045153 | text = electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0020037 | text = heme binding}}{{GO|id=GO:0009055 | text = electron carrier activity}}{{GO|id=GO:0051536 | text = iron-sulfur cluster binding}}{{GO|id=GO:0051537 | text = 2 iron, 2 sulfur cluster binding}} | ||
| + | |PROCESS={{GO|id=GO:0009060 | text = aerobic respiration}}{{GO|id=GO:0006118 | text = electron transport}}{{GO|id=GO:0006508 | text = proteolysis}}{{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0006122 | text = mitochondrial electron transport, ubiquinol to cytochrome c}}{{GO|id=GO:0006119 | text = oxidative phosphorylation}}{{GO|id=GO:0017062 | text = cytochrome bc(1) complex assembly}}{{GO|id=GO:0016226 | text = iron-sulfur cluster assembly}} | ||
| + | |COMPONENT={{GO|id=GO:0005746 | text = mitochondrial respiratory chain}}{{GO|id=GO:0005739 | text = mitochondrion}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0005750 | text = mitochondrial respiratory chain complex III}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0005743 | text = mitochondrial inner membrane}}{{GO|id=GO:0005740 | text = mitochondrial envelope}}{{GO|id=GO:0005758 | text = mitochondrial intermembrane space}} | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoA02 1Kyoa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoA01 1Kyoa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoB02 1Kyob02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoB01 1Kyob01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoC00 1Kyoc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoD01 1Kyod01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoD02 1Kyod02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoE01 1Kyoe01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoE02 1Kyoe02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoF00 1Kyof00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoG00 1Kyog00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoH00 1Kyoh00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoI00 1Kyoi00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoJ00 1Kyoj00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoK00 1Kyok00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoL02 1Kyol02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoL01 1Kyol01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoM02 1Kyom02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoM01 1Kyom01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoN00 1Kyon00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoO01 1Kyoo01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoO02 1Kyoo02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoP01 1Kyop01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoP02 1Kyop02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoQ00 1Kyoq00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoR00 1Kyor00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoS00 1Kyos00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoT00 1Kyot00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoU00 1Kyou00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoV00 1Kyov00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kyoW00 1Kyow00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011237 Ipr011237], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001431 Ipr001431], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007863 Ipr007863], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011249 Ipr011249], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011765 Ipr011765], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005798 Ipr005798], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005797 Ipr005797], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002326 Ipr002326], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009056 Ipr009056], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004192 Ipr004192], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006317 Ipr006317], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005806 Ipr005806], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014349 Ipr014349], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005805 Ipr005805], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003422 Ipr003422], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003197 Ipr003197], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004205 Ipr004205], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008027 Ipr008027], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003088 Ipr003088], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012125 Ipr012125], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002327 Ipr002327]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00675 PF00675], [http://pfam.sanger.ac.uk/family?acc=PF05193 PF05193], [http://pfam.sanger.ac.uk/family?acc=PF00032 PF00032], [http://pfam.sanger.ac.uk/family?acc=PF00033 PF00033], [http://pfam.sanger.ac.uk/family?acc=PF02167 PF02167], [http://pfam.sanger.ac.uk/family?acc=PF02921 PF02921], [http://pfam.sanger.ac.uk/family?acc=PF00355 PF00355], [http://pfam.sanger.ac.uk/family?acc=PF02271 PF02271], [http://pfam.sanger.ac.uk/family?acc=PF02939 PF02939], [http://pfam.sanger.ac.uk/family?acc=PF05365 PF05365], [http://pfam.sanger.ac.uk/family?acc=PF00034 PF00034]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73250 d1kyoa2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73249 d1kyoa1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73252 d1kyob2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73251 d1kyob1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=75904 d1kyoc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=75905 d1kyoc3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73255 d1kyod2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73254 d1kyod1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73257 d1kyoe2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73256 d1kyoe1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73258 d1kyof_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73259 d1kyog_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73260 d1kyoh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73261 d1kyoi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73264 d1kyol1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73265 d1kyol2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73267 d1kyom2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73266 d1kyom1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=75906 d1kyon2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=75907 d1kyon3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73270 d1kyoo2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73269 d1kyoo1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73271 d1kyop1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73272 d1kyop2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73273 d1kyoq_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73274 d1kyor_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73275 d1kyos_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73276 d1kyot_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=73279 d1kyow_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P07256 P07256], [http://ca.expasy.org/cgi-bin/niceprot.pl?P07257 P07257], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00163 P00163], [http://ca.expasy.org/cgi-bin/niceprot.pl?P07143 P07143], [http://ca.expasy.org/cgi-bin/niceprot.pl?P08067 P08067], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00127 P00127], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00128 P00128], [http://ca.expasy.org/cgi-bin/niceprot.pl?P08525 P08525], [http://ca.expasy.org/cgi-bin/niceprot.pl?P22289 P22289], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00044 P00044]</span> | ||
}} | }} | ||
