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| | {{STRUCTURE_1bh4| PDB=1bh4 | SCENE= }} | | {{STRUCTURE_1bh4| PDB=1bh4 | SCENE= }} |
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| - | '''CIRCULIN A FROM CHASSALIA PARVIFLORA, NMR, 12 STRUCTURES'''
| + | ===CIRCULIN A FROM CHASSALIA PARVIFLORA, NMR, 12 STRUCTURES=== |
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| - | ==Overview==
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| - | The three-dimensional solution structure of circulin A, a 30 residue polypeptide from the African plant Chassalia parvifolia, has been determined using two-dimensional 1H-NMR spectroscopy. Circulin A was originally identified based upon its inhibition of the cytopathic effects and replication of the human immunodeficiency virus. Structural restraints consisting of 369 interproton distances inferred from nuclear Overhauser effects, and 21 backbone dihedral and nine chi1 angle restraints from spin-spin coupling constants were used as input for simulated annealing calculations and energy minimisation in the program X-PLOR. The final set of 12 structures had mean pairwise rms differences over the whole molecule of 0.91 A for the backbone atom, and 1.68 A for all heavy atoms. For the well-defined region encompassing residues 2-12 and 18-27, the corresponding values were 0.71 and 1.66 A, respectively. Circulin A adopts a compact structure consisting of beta-turns and a distorted segment of triple-stranded beta-sheet. Fluorescence spectroscopy provided additional evidence for a solvent-exposed Trp residue. The molecule is stabilised by three disulfide bonds, two of which form an embedded loop completed by the backbone fragments connecting the cysteine residues. A third disulfide bond threads through the centre of this loop to form a "cystine-knot" motif. This motif is present in a range of other biologically active proteins, including omega-contoxin GVIA and Cucurbita maxima trypsin inhibitor. Circulin A belongs to a novel class of macrocyclic peptides which have been isolated from plants in the Rubiaceae family. The global fold of circulin A is similar to kalata B1, the only member of this class for which a structure has previously been determined. | + | The line below this paragraph, {{ABSTRACT_PUBMED_9878410}}, adds the Publication Abstract to the page |
| | + | (as it appears on PubMed at http://www.pubmed.gov), where 9878410 is the PubMed ID number. |
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| | + | {{ABSTRACT_PUBMED_9878410}} |
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| | ==About this Structure== | | ==About this Structure== |
| - | 1BH4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chassalia_parviflora Chassalia parviflora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BH4 OCA]. | + | 1BH4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chassalia_parviflora Chassalia parviflora]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BH4 OCA]. |
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| | ==Reference== | | ==Reference== |
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| | [[Category: Cyclic peptide]] | | [[Category: Cyclic peptide]] |
| | [[Category: Cystine knot]] | | [[Category: Cystine knot]] |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 11:30:10 2008'' | + | |
| | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:09:34 2008'' |
Revision as of 16:09, 30 June 2008
Template:STRUCTURE 1bh4
CIRCULIN A FROM CHASSALIA PARVIFLORA, NMR, 12 STRUCTURES
Template:ABSTRACT PUBMED 9878410
About this Structure
1BH4 is a Single protein structure of sequence from Chassalia parviflora. Full experimental information is available from OCA.
Reference
Solution structure by NMR of circulin A: a macrocyclic knotted peptide having anti-HIV activity., Daly NL, Koltay A, Gustafson KR, Boyd MR, Casas-Finet JR, Craik DJ, J Mol Biol. 1999 Jan 8;285(1):333-45. PMID:9878410
Page seeded by OCA on Mon Jun 30 19:09:34 2008
