This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1ca1
From Proteopedia
(Difference between revisions)
m (Protected "Template:STRUCTURE 1ca1" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | {{ | + | {{StructureD |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1ca1, resolution 1. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1ca1, resolution 1.90Å (<scene name='initialview01'>initial scene</scene>)}}} |
|SITE= <scene name='pdbsite=C10:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>C10</scene>, <scene name='pdbsite=C11:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>C11</scene>, <scene name='pdbsite=C12:Cd+From+Crystallisation+Buffer+At+Protein+Surface.+Possi+...'>C12</scene>, <scene name='pdbsite=CA1:Possible+Ca+Binding+Site.+Currently+Low+Occupancy+Cd+Ion+...'>CA1</scene>, <scene name='pdbsite=CD2:2nd+Zn+Binding+Site,+Containing+Cd+From+Crystallisation+...'>CD2</scene>, <scene name='pdbsite=CD3:3nd+Zn+Binding+Site,+Containing+Cd+From+Crystallisation+...'>CD3</scene>, <scene name='pdbsite=CD4:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD4</scene>, <scene name='pdbsite=CD5:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD5</scene>, <scene name='pdbsite=CD6:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD6</scene>, <scene name='pdbsite=CD7:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD7</scene>, <scene name='pdbsite=CD8:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD8</scene>, <scene name='pdbsite=CD9:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD9</scene> and <scene name='pdbsite=ZN1:Zn+Binding+Site+At+Active+Site'>ZN1</scene> | |SITE= <scene name='pdbsite=C10:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>C10</scene>, <scene name='pdbsite=C11:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>C11</scene>, <scene name='pdbsite=C12:Cd+From+Crystallisation+Buffer+At+Protein+Surface.+Possi+...'>C12</scene>, <scene name='pdbsite=CA1:Possible+Ca+Binding+Site.+Currently+Low+Occupancy+Cd+Ion+...'>CA1</scene>, <scene name='pdbsite=CD2:2nd+Zn+Binding+Site,+Containing+Cd+From+Crystallisation+...'>CD2</scene>, <scene name='pdbsite=CD3:3nd+Zn+Binding+Site,+Containing+Cd+From+Crystallisation+...'>CD3</scene>, <scene name='pdbsite=CD4:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD4</scene>, <scene name='pdbsite=CD5:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD5</scene>, <scene name='pdbsite=CD6:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD6</scene>, <scene name='pdbsite=CD7:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD7</scene>, <scene name='pdbsite=CD8:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD8</scene>, <scene name='pdbsite=CD9:Cd+From+Crystallisation+Buffer+At+Protein+Surface'>CD9</scene> and <scene name='pdbsite=ZN1:Zn+Binding+Site+At+Active+Site'>ZN1</scene> | ||
|LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
| Line 6: | Line 6: | ||
|GENE= CPA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1502 Clostridium perfringens]) | |GENE= CPA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1502 Clostridium perfringens]) | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00882 Zn_dep_PLPC], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00113 PLAT]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00882 Zn_dep_PLPC], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00113 PLAT]</span> | ||
| - | |RELATEDENTRY= | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ca1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ca1 OCA], [http://www.ebi.ac.uk/pdbsum/1ca1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ca1 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ca1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ca1 OCA], [http://www.ebi.ac.uk/pdbsum/1ca1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ca1 RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0004629 | text = phospholipase C activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}} | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ca1001 1Ca1001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ca1002 1Ca1002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001531 Ipr001531], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001024 Ipr001024], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008976 Ipr008976], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008947 Ipr008947], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000907 Ipr000907]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00882 PF00882]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=19340 d1ca1_1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=23648 d1ca1_2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q1HX92 Q1HX92]</span> | ||
}} | }} | ||
