1kli

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{{STRUCTURE_1kli| PDB=1kli | SCENE= }}
{{STRUCTURE_1kli| PDB=1kli | SCENE= }}
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'''Cofactor-and substrate-assisted activation of factor VIIa'''
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===Cofactor-and substrate-assisted activation of factor VIIa===
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==Overview==
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Factor VIIa initiates the extrinsic coagulation cascade; this event requires a delicately balanced regulation that is implemented on different levels, including a sophisticated multi-step activation mechanism of factor VII. Its central role in hemostasis and thrombosis makes factor VIIa a key target of pharmaceutical research. We succeeded, for the first time, in recombinantly producing N-terminally truncated factor VII (rf7) in an Escherichia coli expression system by employing an oxidative, in vitro, folding protocol, which depends critically on the presence of ethylene glycol. Activated recombinant factor VIIa (rf7a) was crystallised in the presence of the reversible S1-site inhibitor benzamidine. Comparison of this 1.69A crystal structure with that of an inhibitor-free and sulphate-free, but isomorphous crystal form identified structural details of factor VIIa stimulation. The stabilisation of Asp189-Ser190 by benzamidine and the capping of the intermediate helix by a sulphate ion appear to be sufficient to mimic the disorder-order transition conferred by the cofactor tissue factor (TF) and the substrate factor X. Factor VIIa shares with the homologous factor IXa, but not factor Xa, a bell-shaped activity modulation dependent on ethylene glycol. The ethylene glycol-binding site of rf7a was identified in the vicinity of the 60 loop. Ethylene glycol binding induces a significant conformational rearrangement of the 60 loop. This region serves as a recognition site of the physiologic substrate, factor X, which is common to both factor VIIa and factor IXa. These results provide a mechanistic framework of substrate-assisted catalysis of both factor VIIa and factor IXa.
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(as it appears on PubMed at http://www.pubmed.gov), where 12225752 is the PubMed ID number.
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{{ABSTRACT_PUBMED_12225752}}
==About this Structure==
==About this Structure==
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[[Category: Serine protease activation]]
[[Category: Serine protease activation]]
[[Category: Substrate-assisted catalysis]]
[[Category: Substrate-assisted catalysis]]
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Revision as of 07:30, 2 July 2008

Image:1kli.png

Template:STRUCTURE 1kli

Cofactor-and substrate-assisted activation of factor VIIa

Template:ABSTRACT PUBMED 12225752

About this Structure

1KLI is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Crystal structures of uninhibited factor VIIa link its cofactor and substrate-assisted activation to specific interactions., Sichler K, Banner DW, D'Arcy A, Hopfner KP, Huber R, Bode W, Kresse GB, Kopetzki E, Brandstetter H, J Mol Biol. 2002 Sep 20;322(3):591-603. PMID:12225752

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