This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1pnb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1pnb.gif|left|200px]]
+
{{Seed}}
 +
[[Image:1pnb.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1pnb| PDB=1pnb | SCENE= }}
{{STRUCTURE_1pnb| PDB=1pnb | SCENE= }}
-
'''STRUCTURE OF NAPIN BNIB, NMR, 10 STRUCTURES'''
+
===STRUCTURE OF NAPIN BNIB, NMR, 10 STRUCTURES===
-
==Overview==
+
<!--
-
Napin BnIb is a representative member of the 2S albumin seed proteins, which consists of two polypeptide chains of 3.8 and 8.4 kDa linked by two disulfide bridges. In this work, a complete assignment of the 1H spectra of napin BnIb has been carried out by two-dimensional NMR sequence-specific methods and its secondary structure determined on the basis of spectral data. A calculation of the tertiary structure has been performed using approximately 500 distance constraints derived from unambiguously assigned NOE cross-correlations and distance geometry methods. The resulting global fold consists of five helices and a C-terminal loop arranged in a right-handed spiral. The folded protein is stabilized by two interchain disulfide bridges and two additional ones between cysteine residues in the large chain. The structure of napin BnIb represents a third example of a new and distinctive folding pattern first described for the hydrophobic protein from soybean and nonspecific lipid transfer proteins from wheat and maize. The presence of an internal cavity is not at all evident, which rules out in principle the napin BnIb as a carrier of lipids. The determined structure is compatible with activities attributed to these proteins such as phospholipid vesicle interaction, allergenicity, and calmodulin antagonism. Given the sequence homology of BnIb with other napins and napin-type 2S albumin seed proteins from different species, it is likely that all these proteins share a common architecture. The determined structure will be crucial to establish structure-function relationships and to explore the mechanisms of folding, processing, and deposition of these proteins. It will also provide a firm basis for a rational use of genetic engineering in order to develop improved transgenic plants.
+
The line below this paragraph, {{ABSTRACT_PUBMED_8961930}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 8961930 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_8961930}}
==About this Structure==
==About this Structure==
-
1PNB is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Brassica_napus Brassica napus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNB OCA].
+
1PNB is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Brassica_napus Brassica napus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNB OCA].
==Reference==
==Reference==
Line 30: Line 34:
[[Category: Napin ia and ib]]
[[Category: Napin ia and ib]]
[[Category: Seed storage protein]]
[[Category: Seed storage protein]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 05:16:32 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 16:22:23 2008''

Revision as of 13:22, 27 July 2008

Image:1pnb.png

Template:STRUCTURE 1pnb

STRUCTURE OF NAPIN BNIB, NMR, 10 STRUCTURES

Template:ABSTRACT PUBMED 8961930

About this Structure

1PNB is a Protein complex structure of sequences from Brassica napus. Full experimental information is available from OCA.

Reference

1H NMR assignment and global fold of napin BnIb, a representative 2S albumin seed protein., Rico M, Bruix M, Gonzalez C, Monsalve RI, Rodriguez R, Biochemistry. 1996 Dec 10;35(49):15672-82. PMID:8961930

Page seeded by OCA on Sun Jul 27 16:22:23 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1pnb"
Personal tools