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2jnp

From Proteopedia

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[[Image:2jnp.jpg|left|200px]]
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{{Seed}}
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[[Image:2jnp.png|left|200px]]
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{{STRUCTURE_2jnp| PDB=2jnp | SCENE= }}
{{STRUCTURE_2jnp| PDB=2jnp | SCENE= }}
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'''Solution structure of matrix metalloproteinase 3 (MMP-3) in the presence of N-isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)'''
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===Solution structure of matrix metalloproteinase 3 (MMP-3) in the presence of N-isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)===
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==Overview==
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We structurally characterized the adducts of the catalytic domain of matrix metalloproteinase-3 (MMP3) with three different nonpeptidic inhibitors by solving the solution structure of one adduct [MMP3-N-isobutyl-N-(4-methoxyphenylsulfonyl)glycyl hydroxamic acid] and then by calculating structural models of the other two adducts using a reduced set of experimental NMR data, following a recently proposed procedure (Bertini et al. in J. Med. Chem. 48:7544-7559, 2005). The inhibitors were selected with the criteria of maintaining in all of them the same zinc-coordinating moiety and of selectively changing the substituents and/or the functional groups. The backbone dynamics on various time scales have been characterized as well. The comparison among these structures and with others previously reported allowed us to elucidate fine details of inhibitor-receptor interactions and to develop some criteria, which could guide in optimizing the design of selective inhibitors.
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The line below this paragraph, {{ABSTRACT_PUBMED_17710450}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 17710450 is the PubMed ID number.
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{{ABSTRACT_PUBMED_17710450}}
==About this Structure==
==About this Structure==
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2JNP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JNP OCA].
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2JNP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JNP OCA].
==Reference==
==Reference==
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[[Category: Mmp]]
[[Category: Mmp]]
[[Category: Nmr]]
[[Category: Nmr]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 09:04:50 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 18:55:41 2008''

Revision as of 15:55, 27 July 2008

Image:2jnp.png

Template:STRUCTURE 2jnp

Solution structure of matrix metalloproteinase 3 (MMP-3) in the presence of N-isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)

Template:ABSTRACT PUBMED 17710450

About this Structure

2JNP is a Single protein structure of sequence from Homo sapiens. Full experimental information is available from OCA.

Reference

Matrix metalloproteinase-inhibitor interaction: the solution structure of the catalytic domain of human matrix metalloproteinase-3 with different inhibitors., Alcaraz LA, Banci L, Bertini I, Cantini F, Donaire A, Gonnelli L, J Biol Inorg Chem. 2007 Nov;12(8):1197-206. Epub 2007 Aug 21. PMID:17710450

Page seeded by OCA on Sun Jul 27 18:55:41 2008

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