This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xfq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1xfq.gif|left|200px]]
+
{{Seed}}
 +
[[Image:1xfq.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1xfq| PDB=1xfq | SCENE= }}
{{STRUCTURE_1xfq| PDB=1xfq | SCENE= }}
-
'''structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part'''
+
===structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part===
-
==Overview==
+
<!--
-
The N-terminally truncated variant of photoactive yellow protein (Delta25-PYP) undergoes a very similar photocycle as the corresponding wild-type protein (WT-PYP), although the lifetime of its light-illuminated (pB) state is much longer. This has allowed determination of the structure of both its dark- (pG) as well as its pB-state in solution by nuclear magnetic resonance (NMR) spectroscopy. The pG structure shows a well-defined fold, similar to WT-PYP and the X-ray structure of the pG state of Delta25-PYP. In the long-lived photocycle intermediate pB, the central beta sheet is still intact, as well as a small part of one alpha helix. The remainder of pB is unfolded and highly flexible, as evidenced by results from proton-deuterium exchange and NMR relaxation studies. Thus, the partially unfolded nature of the presumed signaling state of PYP in solution, as suggested previously, has now been structurally demonstrated.
+
The line below this paragraph, {{ABSTRACT_PUBMED_16004868}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 16004868 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_16004868}}
==About this Structure==
==About this Structure==
-
1XFQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halorhodospira_halophila Halorhodospira halophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XFQ OCA].
+
1XFQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halorhodospira_halophila Halorhodospira halophila]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XFQ OCA].
==Reference==
==Reference==
Line 32: Line 36:
[[Category: Nuland, N A.van.]]
[[Category: Nuland, N A.van.]]
[[Category: Pas domain]]
[[Category: Pas domain]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 14:58:13 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 03:56:40 2008''

Revision as of 00:56, 28 July 2008

Template:STRUCTURE 1xfq

structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part

Template:ABSTRACT PUBMED 16004868

About this Structure

1XFQ is a Single protein structure of sequence from Halorhodospira halophila. Full experimental information is available from OCA.

Reference

The solution structure of a transient photoreceptor intermediate: Delta25 photoactive yellow protein., Bernard C, Houben K, Derix NM, Marks D, van der Horst MA, Hellingwerf KJ, Boelens R, Kaptein R, van Nuland NA, Structure. 2005 Jul;13(7):953-62. PMID:16004868

Page seeded by OCA on Mon Jul 28 03:56:40 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools