1m26
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(New page: 200px<br /><applet load="1m26" size="450" color="white" frame="true" align="right" spinBox="true" caption="1m26, resolution 1.62Å" /> '''Crystal structure of...)
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Revision as of 18:57, 20 November 2007
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Crystal structure of jacalin-T-antigen complex
Overview
Thomsen-Friedenreich antigen (Galbeta1-3GalNAc), generally known as, T-antigen, is expressed in more than 85% of human carcinomas. Therefore, proteins which specifically bind T-antigen have potential diagnostic, value. Jacalin, a lectin from jack fruit (Artocarpus integrifolia) seeds, is a tetramer of molecular mass 66kDa. It is one of the very few proteins, which are known to bind T-antigen. The crystal structure of the, jacalin-T-antigen complex has been determined at 1.62A resolution. The, interactions of the disaccharide at the binding site are predominantly, through the GalNAc moiety, with Gal interacting only through water, molecules. They include a hydrogen bond between the anomeric oxygen of, GalNAc and the pi electrons of an aromatic side-chain. Several, intermolecular interactions involving the bound carbohydrate contribute to, the stability of the crystal structure. The present structure, along with, that of the Me-alpha-Gal complex, provides a reasonable qualitative, explanation for the known affinities of jacalin to different carbohydrate, ligands and a plausible model of the binding of the lectin to T-antigen, O-linked to seryl or threonyl residues. Including the present one, the, structures of five lectin-T-antigen complexes are available. GalNAc, occupies the primary binding site in three of them, while Gal occupies the, site in two. The choice appears to be related to the ability of the lectin, to bind sialylated sugars. In either case, most of the lectin-disaccharide, interactions are at the primary binding site. The conformation of, T-antigen in the five complexes is nearly the same.
About this Structure
1M26 is a Protein complex structure of sequences from Artocarpus integrifolia. Full crystallographic information is available from OCA.
Reference
Crystal structure of the jacalin-T-antigen complex and a comparative study of lectin-T-antigen complexes., Jeyaprakash AA, Geetha Rani P, Banuprakash Reddy G, Banumathi S, Betzel C, Sekar K, Surolia A, Vijayan M, J Mol Biol. 2002 Aug 23;321(4):637-45. PMID:12206779
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