2fz1

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{{STRUCTURE_2fz1| PDB=2fz1 | SCENE= }}
{{STRUCTURE_2fz1| PDB=2fz1 | SCENE= }}
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'''Structure of Empty Head Turnip Yellow Mosaic Virus (ATC) at 100 K'''
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===Structure of Empty Head Turnip Yellow Mosaic Virus (ATC) at 100 K===
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==Overview==
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Difference electron density maps, based on structure factor amplitudes and experimental phases from crystals of wild-type turnip yellow mosaic virus and those of empty capsids prepared by freeze-thawing, show a large portion of the encapsidated RNA to have an icosahedral distribution. Four unique segments of base-paired, double-helical RNA, one to two turns in length, lie between 33-A and 101-A radius and are organized about either 2-fold or 5-fold icosahedral axes. In addition, single-stranded loops of RNA invade the pentameric and hexameric capsomeres where they contact the interior capsid surface. The remaining RNA, not seen in electron density maps, must serve as connecting links between these secondary structural elements and is likely icosahedrally disordered. The distribution of RNA observed crystallographically appears to be in agreement with models based on biochemical data and secondary structural analyses.
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The line below this paragraph, {{ABSTRACT_PUBMED_15780874}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 15780874 is the PubMed ID number.
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{{ABSTRACT_PUBMED_15780874}}
==About this Structure==
==About this Structure==
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==Reference==
==Reference==
The RNA of turnip yellow mosaic virus exhibits icosahedral order., Larson SB, Lucas RW, Greenwood A, McPherson A, Virology. 2005 Apr 10;334(2):245-54. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15780874 15780874]
The RNA of turnip yellow mosaic virus exhibits icosahedral order., Larson SB, Lucas RW, Greenwood A, McPherson A, Virology. 2005 Apr 10;334(2):245-54. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15780874 15780874]
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Crystal structure of turnip yellow mosaic virus., Canady MA, Larson SB, Day J, McPherson A, Nat Struct Biol. 1996 Sep;3(9):771-81. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8784351 8784351]
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Preliminary X-ray diffraction analysis of crystals of turnip yellow mosaic virus (TYMV)., Canady MA, Day J, McPherson A, Proteins. 1995 Jan;21(1):78-81. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7716173 7716173]
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Crystal structure of an empty capsid of turnip yellow mosaic virus., van Roon AM, Bink HH, Plaisier JR, Pleij CW, Abrahams JP, Pannu NS, J Mol Biol. 2004 Aug 27;341(5):1205-14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15321716 15321716]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Larson, S B.]]
[[Category: Larson, S B.]]
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[[Category: Tymoviruse]]
[[Category: Tymoviruse]]
[[Category: Tymv]]
[[Category: Tymv]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:28:25 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 11:07:47 2008''

Revision as of 08:07, 28 July 2008

Image:2fz1.png

Template:STRUCTURE 2fz1

Structure of Empty Head Turnip Yellow Mosaic Virus (ATC) at 100 K

Template:ABSTRACT PUBMED 15780874

About this Structure

2FZ1 is a Single protein structure of sequence from Turnip yellow mosaic virus (isolate australia). Full crystallographic information is available from OCA.

Reference

The RNA of turnip yellow mosaic virus exhibits icosahedral order., Larson SB, Lucas RW, Greenwood A, McPherson A, Virology. 2005 Apr 10;334(2):245-54. PMID:15780874

Crystal structure of turnip yellow mosaic virus., Canady MA, Larson SB, Day J, McPherson A, Nat Struct Biol. 1996 Sep;3(9):771-81. PMID:8784351

Preliminary X-ray diffraction analysis of crystals of turnip yellow mosaic virus (TYMV)., Canady MA, Day J, McPherson A, Proteins. 1995 Jan;21(1):78-81. PMID:7716173

Crystal structure of an empty capsid of turnip yellow mosaic virus., van Roon AM, Bink HH, Plaisier JR, Pleij CW, Abrahams JP, Pannu NS, J Mol Biol. 2004 Aug 27;341(5):1205-14. PMID:15321716

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