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3b9v

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{{STRUCTURE_3b9v| PDB=3b9v | SCENE= }}
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'''Crystal Structure of an Autonomous VH Domain'''
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===Crystal Structure of an Autonomous VH Domain===
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==Overview==
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We report a comprehensive analysis of sequence features that allow for the production of autonomous human heavy chain variable (V(H)) domains that are stable and soluble in the absence of a light chain partner. Using combinatorial phage-displayed libraries and conventional biophysical methods, we analyzed the entire former light chain interface and the third complementarity determining region (CDR3). Unlike the monomeric variable domains of camelid heavy chain antibodies (V(H)H domains), in which autonomous behavior depends on interactions between the hydrophobic former light chain interface and CDR3, we find that the stability of many in vitro evolved V(H) domains is essentially independent of the CDR3 sequence and instead derives from mutations that increase the hydrophilicity of the former light chain interface by replacing exposed hydrophobic residues with structurally compatible hydrophilic substitutions. The engineered domains can be expressed recombinantly at high yield, are predominantly monomeric at high concentrations, unfold reversibly, and are even more thermostable than typical camelid V(H)H domains. Many of the stabilizing mutations are rare in natural V(H) and V(H)H domains and thus could not be predicted by studying natural sequences and structures. The results demonstrate that autonomous V(H) domains with structural properties beyond the scope of natural frameworks can be derived by using non-natural mutations, which differ from those found in camelid V(H)H domains. These findings should enable the development of libraries of synthetic V(H) domains with CDR3 diversities unconstrained by structural demands.
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{{ABSTRACT_PUBMED_18045863}}
==About this Structure==
==About this Structure==
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[[Category: Phage display]]
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[[Category: X-ray crystallography]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:33:40 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 19:41:24 2008''

Revision as of 16:41, 28 July 2008

Image:3b9v.png

Template:STRUCTURE 3b9v

Crystal Structure of an Autonomous VH Domain

Template:ABSTRACT PUBMED 18045863

About this Structure

Full crystallographic information is available from OCA.

Reference

Comprehensive Analysis of the Factors Contributing to the Stability and Solubility of Autonomous Human VH Domains., Barthelemy PA, Raab H, Appleton BA, Bond CJ, Wu P, Wiesmann C, Sidhu SS, J Biol Chem. 2008 Feb 8;283(6):3639-54. Epub 2007 Nov 28. PMID:18045863

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