1wts

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[[Image:1wts.gif|left|200px]]
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{{STRUCTURE_1wts| PDB=1wts | SCENE= }}
{{STRUCTURE_1wts| PDB=1wts | SCENE= }}
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'''HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE'''
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===HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE===
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==Overview==
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BACKGROUND: Ribosomal RNAs contain many modified nucleotides. The functions of these nucleotides are poorly understood and few of them are strongly conserved. The final stem loop in 16S-like rRNAs is an exception in both regards. In both prokaryotes and eukaryotes, the tetranucleotide loop that caps the 3'-terminal stem contains two N6, N6-dimethyladenosine residues. The sequence and pattern of methylation are conserved within the loop, and there is evidence that these methylated nucleotides play an important role in subunit association and the initiation of protein synthesis. Because of the integral role that helix 45 plays in ribosome function, it is important to know what consequences these methylated nucleotides have on its structure. RESULTS: We have solved the solution structure of a 14-nucleotide analog of the terminal stem loop of bacterial 16S rRNA, which contains N2-methylguanosine as well as two N6,N6-dimethyladenosines. CONCLUSIONS: The methylation of the 16S rRNA stem loop completely alters its conformation, which would otherwise be a GNRA tetraloop. It is likely that the conformation of this loop is crucial for its function, having implications for its interaction with ribosomal subunits and its role in the initiation of protein synthesis.
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The line below this paragraph, {{ABSTRACT_PUBMED_9655826}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 9655826 is the PubMed ID number.
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{{ABSTRACT_PUBMED_9655826}}
==About this Structure==
==About this Structure==
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTS OCA].
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Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTS OCA].
==Reference==
==Reference==
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[[Category: Rna]]
[[Category: Rna]]
[[Category: Tetraloop]]
[[Category: Tetraloop]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 14:07:39 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 21:11:27 2008''

Revision as of 18:11, 28 July 2008

Image:1wts.png

Template:STRUCTURE 1wts

HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE

Template:ABSTRACT PUBMED 9655826

About this Structure

Full experimental information is available from OCA.

Reference

The structure of a methylated tetraloop in 16S ribosomal RNA., Rife JP, Moore PB, Structure. 1998 Jun 15;6(6):747-56. PMID:9655826

Page seeded by OCA on Mon Jul 28 21:11:27 2008

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