1r9t

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[[Image:1r9t.gif|left|200px]]
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{{Seed}}
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[[Image:1r9t.png|left|200px]]
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{{STRUCTURE_1r9t| PDB=1r9t | SCENE= }}
{{STRUCTURE_1r9t| PDB=1r9t | SCENE= }}
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'''RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE'''
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===RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE===
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==Overview==
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Binding of a ribonucleoside triphosphate to an RNA polymerase II transcribing complex, with base pairing to the template DNA, was revealed by X-ray crystallography. Binding of a mismatched nucleoside triphosphate was also detected, but in an adjacent site, inverted with respect to the correctly paired nucleotide. The results are consistent with a two-step mechanism of nucleotide selection, with initial binding to an entry (E) site beneath the active center in an inverted orientation, followed by rotation into the nucleotide addition (A) site for pairing with the template DNA. This mechanism is unrelated to that of single subunit RNA polymerases and so defines a new paradigm for the large, multisubunit enzymes. Additional findings from these studies include a third nucleotide binding site that may define the length of backtracked RNA; DNA double helix unwinding in advance of the polymerase active center; and extension of the diffraction limit of RNA polymerase II crystals to 2.3 A.
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The line below this paragraph, {{ABSTRACT_PUBMED_15537538}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 15537538 is the PubMed ID number.
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{{ABSTRACT_PUBMED_15537538}}
==About this Structure==
==About this Structure==
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[[Category: Multiprotein complex]]
[[Category: Multiprotein complex]]
[[Category: Transcription]]
[[Category: Transcription]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:15:04 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 01:31:00 2008''

Revision as of 22:31, 28 July 2008

Image:1r9t.png

Template:STRUCTURE 1r9t

RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE

Template:ABSTRACT PUBMED 15537538

About this Structure

1R9T is a Protein complex structure of sequences from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

Reference

Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center., Westover KD, Bushnell DA, Kornberg RD, Cell. 2004 Nov 12;119(4):481-9. PMID:15537538

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