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| | {{STRUCTURE_1sym| PDB=1sym | SCENE= }} | | {{STRUCTURE_1sym| PDB=1sym | SCENE= }} |
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| - | '''3-D SOLUTION STRUCTURE OF REDUCED APO-S100B FROM RAT, NMR, 20 STRUCTURES'''
| + | ===3-D SOLUTION STRUCTURE OF REDUCED APO-S100B FROM RAT, NMR, 20 STRUCTURES=== |
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| - | ==Overview==
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| - | S100B(beta beta), a member of the S100 protein family, is a Ca(2+)-binding protein with noncovalent interactions at its dimer interface. Each apo-S100 beta subunit (91 residues) has four alpha-helices and a small antiparallel beta-sheet, consistent with two predicted helix-loop-helix Ca(2+)-binding domains known as EF-hands [Amburgey et al. (1995) J. Biomol. NMR 6, 171-179]. The three-dimensional solution structure of apo-S100B(beta beta) from rat has been determined using 2672 distance (14.7 per residue) and 88 dihedral angle restraints derived from multidimensional nuclear magnetic resonance spectroscopy. Apo-S100B (beta beta) is found to be globular and compact with an extensive hydrophobic core and a highly charged surface, consistent with its high solubility. At the symmetric dimer interface, 172 intermolecular nuclear Overhauser effect correlations (NOEs) define the antiparallel alignment of helix I with I' and of helix IV with IV'. The perpendicular association of these pairs of antiparallel helices forms an X-type four-helical bundle at the dimer interface. Whereas, the four helices within each apo-S100 beta subunit adopt a unicornate-type four-helix bundle, with helix I protruding from the parallel bundle of helices II, III, and IV. Accordingly, the orientation of helix III relative to helices I, II, and IV in each subunit differs significantly from that known for other Ca(2+)-binding proteins. Indeed, the interhelical angle (omega) observed in the C-terminal EF-hand of apo-S100 beta is -142 degrees, whereas omega ranges from 118 degrees to 145 degrees in the apo state and from 84 degrees to 128 degrees in the Ca(2+)-bound state for the EF-hands of calbindin D9k, calcyclin, and calmodulin. Thus, a significant conformational change in the C-terminal EF-hand would be required for it to adopt a structure typical of the Ca(2+)-bound state, which could readily explain the dramatic spectral effects observed upon the addition of Ca2+ to apo-S100B(beta beta).
| + | The line below this paragraph, {{ABSTRACT_PUBMED_8794737}}, adds the Publication Abstract to the page |
| | + | (as it appears on PubMed at http://www.pubmed.gov), where 8794737 is the PubMed ID number. |
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| | + | {{ABSTRACT_PUBMED_8794737}} |
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| | ==About this Structure== | | ==About this Structure== |
| - | 1SYM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SYM OCA]. | + | 1SYM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SYM OCA]. |
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| | ==Reference== | | ==Reference== |
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| | [[Category: Calcium-binding protein]] | | [[Category: Calcium-binding protein]] |
| | [[Category: Metal-binding]] | | [[Category: Metal-binding]] |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 09:17:04 2008'' | + | |
| | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 02:15:58 2008'' |
Revision as of 23:16, 28 July 2008
Template:STRUCTURE 1sym
3-D SOLUTION STRUCTURE OF REDUCED APO-S100B FROM RAT, NMR, 20 STRUCTURES
Template:ABSTRACT PUBMED 8794737
About this Structure
1SYM is a Single protein structure of sequence from Rattus norvegicus. Full experimental information is available from OCA.
Reference
Solution structure of rat apo-S100B(beta beta) as determined by NMR spectroscopy., Drohat AC, Amburgey JC, Abildgaard F, Starich MR, Baldisseri D, Weber DJ, Biochemistry. 1996 Sep 10;35(36):11577-88. PMID:8794737
Page seeded by OCA on Tue Jul 29 02:15:58 2008
