This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xef

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1xef.gif|left|200px]]
+
{{Seed}}
 +
[[Image:1xef.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1xef| PDB=1xef | SCENE= }}
{{STRUCTURE_1xef| PDB=1xef | SCENE= }}
-
'''Crystal structure of the ATP/Mg2+ bound composite dimer of HlyB-NBD'''
+
===Crystal structure of the ATP/Mg2+ bound composite dimer of HlyB-NBD===
-
==Overview==
+
<!--
-
The ABC transporter HlyB is a central element of the HlyA secretion machinery, a paradigm of Type I secretion. Here, we describe the crystal structure of the HlyB-NBD (nucleotide-binding domain) with H662 replaced by Ala in complex with ATP/Mg2+. The dimer shows a composite architecture, in which two intact ATP molecules are bound at the interface of the Walker A motif and the C-loop, provided by the two monomers. ATPase measurements confirm that H662 is essential for activity. Based on these data, we propose a model in which E631 and H662, highly conserved among ABC transporters, form a catalytic dyad. Here, H662 acts as a 'linchpin', holding together all required parts of a complicated network of interactions between ATP, water molecules, Mg2+, and amino acids both in cis and trans, necessary for intermonomer communication. Based on biochemical experiments, we discuss the hypothesis that substrate-assisted catalysis, rather than general base catalysis might operate in ABC-ATPases.
+
The line below this paragraph, {{ABSTRACT_PUBMED_15889153}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 15889153 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_15889153}}
==About this Structure==
==About this Structure==
Line 30: Line 34:
[[Category: Atpase]]
[[Category: Atpase]]
[[Category: Haemolysin b]]
[[Category: Haemolysin b]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 14:55:20 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 05:12:22 2008''

Revision as of 02:12, 29 July 2008

Template:STRUCTURE 1xef

Crystal structure of the ATP/Mg2+ bound composite dimer of HlyB-NBD

Template:ABSTRACT PUBMED 15889153

About this Structure

1XEF is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

H662 is the linchpin of ATP hydrolysis in the nucleotide-binding domain of the ABC transporter HlyB., Zaitseva J, Jenewein S, Jumpertz T, Holland IB, Schmitt L, EMBO J. 2005 Jun 1;24(11):1901-10. Epub 2005 May 12. PMID:15889153

Page seeded by OCA on Tue Jul 29 05:12:22 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools