This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1pmx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1pmx.gif|left|200px]]
+
{{Seed}}
 +
[[Image:1pmx.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1pmx| PDB=1pmx | SCENE= }}
{{STRUCTURE_1pmx| PDB=1pmx | SCENE= }}
-
'''INSULIN-LIKE GROWTH FACTOR-I BOUND TO A PHAGE-DERIVED PEPTIDE'''
+
===INSULIN-LIKE GROWTH FACTOR-I BOUND TO A PHAGE-DERIVED PEPTIDE===
-
==Overview==
+
<!--
-
The dramatic improvement in the NMR spectra of insulin-like growth factor I (IGF-I) in the presence of a peptide identified from a phage display library has allowed for the first time the determination of a high-resolution solution structure for much of IGF-I. The three helices of IGF-I in this complex have an arrangement similar to that seen in high-resolution crystal structures of IGF-I and insulin, although there are differences in the conformation and precise location of helix 3. A cluster of hydrophobic and basic side chains within the turn-helix motif of the peptide contact a hydrophobic patch on helices 1 and 3 of IGF-I. The importance of this patch for tight binding was verified using alanine scanning mutagenesis of the peptide in two different phage display formats. Consistent with its antagonistic activity, the peptide binds to a region implicated by mutagenesis studies to be important for association with IGF binding proteins (IGFBPs). The ability of the peptide to also inhibit signaling has important implications for the manner in which IGF-I interacts with its receptor. Interestingly, the peptide uses the same binding site as detergent and a fragment of IGFBP-5 identified in other IGF-I complexes. The ligand-induced structural variability of helix 3 in these complexes suggests that exchange between such conformations may be the source of the dynamic nature of free IGF-I and likely has functional significance for the ability of IGF-I to recognize two signaling receptors and six binding proteins with high affinity.
+
The line below this paragraph, {{ABSTRACT_PUBMED_12899619}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 12899619 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_12899619}}
==About this Structure==
==About this Structure==
-
1PMX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PMX OCA].
+
1PMX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PMX OCA].
==Reference==
==Reference==
Line 26: Line 30:
[[Category: Igf-i]]
[[Category: Igf-i]]
[[Category: Peptide binding]]
[[Category: Peptide binding]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 05:15:55 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 05:15:38 2008''

Revision as of 02:15, 29 July 2008

Image:1pmx.png

Template:STRUCTURE 1pmx

INSULIN-LIKE GROWTH FACTOR-I BOUND TO A PHAGE-DERIVED PEPTIDE

Template:ABSTRACT PUBMED 12899619

About this Structure

1PMX is a Single protein structure of sequence from Homo sapiens. Full experimental information is available from OCA.

Reference

Complex with a phage display-derived peptide provides insight into the function of insulin-like growth factor I., Schaffer ML, Deshayes K, Nakamura G, Sidhu S, Skelton NJ, Biochemistry. 2003 Aug 12;42(31):9324-34. PMID:12899619

Page seeded by OCA on Tue Jul 29 05:15:38 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1pmx"
Personal tools