Template:StructureTest

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{#if: {{{CONSURF|}}} | {{StructureCS|CONSURF={{{CONSURF|}}}}}|}})
Line 1: Line 1:
-
{{#if: {{{CONSURF|}}} | {{StructureCS|CONSURF={{{CONSURF|}}}}}|}}
+
{{Structure
 +
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 +
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene>
 +
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
 +
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span>
 +
|FUNCTION={{GO|id=GO:0046914 | text = transition metal ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008199 | text = ferric iron binding}}
 +
|PROCESS={{GO|id=GO:0006879 | text = cellular iron ion homeostasis}}{{GO|id=GO:0006950 | text = response to stress}}
 +
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009078 Ipr009078], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012347 Ipr012347], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002177 Ipr002177], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008331 Ipr008331]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00210 PF00210]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P37960 P37960]</span>
 +
|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_A!=1); select:A; spacefill off;color translucent -1; consurf_A = 1; javascript "document.getElementById('jmb_A').value='A [ ]'"; else; select:A; spacefill on; color opaque;consurf_A = 0;javascript "document.getElementById('jmb_A').value='A [x]';"; endif;</script>
 +
<text>A [x]</text>
 +
<name>jmb_A</name>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_B!=1); select:B; spacefill off;color translucent -1; consurf_B = 1;javascript "document.getElementById('jmb_B').value='B [ ]'"; else; select:B; spacefill on; color opaque;consurf_B = 0;javascript "document.getElementById('jmb_B').value='B [x]';"; endif;</script>
 +
<text>B [x]</text>
 +
<name>jmb_B</name>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_C!=1); select:C; spacefill off;color translucent -1; consurf_C = 1;javascript "document.getElementById('jmb_C').value='C [ ]'"; else; select:C; spacefill on; color opaque;consurf_C = 0;javascript "document.getElementById('jmb_C').value='C [ ]';"; endif;</script>
 +
<text>C [x]</text>
 +
<name>jmb_C</name>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_D!=1); select:D; spacefill off;color translucent -1; consurf_D = 1;javascript "document.getElementById('jmb_D').value='D [ ]'"; else; select:D; spacefill on; color opaque;consurf_D = 0;javascript "document.getElementById('jmb_D').value='D [x]';"; endif;</script>
 +
<text>D [x]</text>
 +
<name>jmb_D</name>
 +
</jmolButton>
 +
</jmol>
 +
}}
 +
 
 +
{{Structure
 +
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 +
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene>
 +
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
 +
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span>
 +
|FUNCTION={{GO|id=GO:0046914 | text = transition metal ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008199 | text = ferric iron binding}}
 +
|PROCESS={{GO|id=GO:0006879 | text = cellular iron ion homeostasis}}{{GO|id=GO:0006950 | text = response to stress}}
 +
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009078 Ipr009078], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012347 Ipr012347], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002177 Ipr002177], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008331 Ipr008331]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00210 PF00210]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P37960 P37960]</span>
 +
}}
 +
 
 +
{{Structure
 +
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 +
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene>
 +
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
 +
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span>
 +
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009078 Ipr009078], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012347 Ipr012347], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002177 Ipr002177], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008331 Ipr008331]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00210 PF00210]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P37960 P37960]</span>
 +
}}
 +
 
 +
{{Structure
 +
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 +
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene>
 +
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
 +
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span>
 +
|FUNCTION={{GO|id=GO:0046914 | text = transition metal ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008199 | text = ferric iron binding}}
 +
|PROCESS={{GO|id=GO:0006879 | text = cellular iron ion homeostasis}}{{GO|id=GO:0006950 | text = response to stress}}
 +
}}
 +
 
 +
{{Structure
 +
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 +
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene>
 +
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
 +
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span>
 +
|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_A!=1); select:A; spacefill off;color translucent -1; consurf_A = 1; javascript "document.getElementById('jmb_A').value='A [ ]'"; else; select:A; spacefill on; color opaque;consurf_A = 0;javascript "document.getElementById('jmb_A').value='A [x]';"; endif;</script>
 +
<text>A [x]</text>
 +
<name>jmb_A</name>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_B!=1); select:B; spacefill off;color translucent -1; consurf_B = 1;javascript "document.getElementById('jmb_B').value='B [ ]'"; else; select:B; spacefill on; color opaque;consurf_B = 0;javascript "document.getElementById('jmb_B').value='B [x]';"; endif;</script>
 +
<text>B [x]</text>
 +
<name>jmb_B</name>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_C!=1); select:C; spacefill off;color translucent -1; consurf_C = 1;javascript "document.getElementById('jmb_C').value='C [ ]'"; else; select:C; spacefill on; color opaque;consurf_C = 0;javascript "document.getElementById('jmb_C').value='C [ ]';"; endif;</script>
 +
<text>C [x]</text>
 +
<name>jmb_C</name>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script>if (consurf_D!=1); select:D; spacefill off;color translucent -1; consurf_D = 1;javascript "document.getElementById('jmb_D').value='D [ ]'"; else; select:D; spacefill on; color opaque;consurf_D = 0;javascript "document.getElementById('jmb_D').value='D [x]';"; endif;</script>
 +
<text>D [x]</text>
 +
<name>jmb_D</name>
 +
</jmolButton>
 +
</jmol>
 +
}}

Revision as of 13:50, 1 February 2009

Drag the structure with the mouse to rotate
2chp, resolution 2.00Å ()
Sites:
Ligands:
Domains: DPS
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Drag the structure with the mouse to rotate
2chp, resolution 2.00Å ()
Sites:
Ligands:
Domains: DPS
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Drag the structure with the mouse to rotate
2chp, resolution 2.00Å ()
Sites:
Ligands:
Domains: DPS


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Drag the structure with the mouse to rotate
2chp, resolution 2.00Å ()
Sites:
Ligands:
Domains: DPS
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Drag the structure with the mouse to rotate
2chp, resolution 2.00Å ()
Sites:
Ligands:
Domains: DPS
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

Eran Hodis

Retrieved from "http://52.214.119.220/wiki/index.php/Template:StructureTest"
Personal tools