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Aconitase

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'''Major Facilitators''' are membrane proteins that help with both influx and outflux of specific small molecules. They are neither passive channels, nor do they active pumping, like the ATPases. Like a rocker-switch, they tilt between the two states 'outside open' and 'inside open'. This tilting (or switching) is triggered when a molecule has docked inside, and it transports the molecule to the other side. There are major facilitator uniporters, symporters, and antiporters. Antiporters usually transport a second, different, molecule, when switching back in the opposite direction. In 2009, there is still no structure data that would clearly show the transport process in major facilitators.
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*[[1b0j]] - S642 mutant of mAc (''Sus scrofa'') with isocitrate (substrate)
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*[[1b0k]] - S642 mutant of mAc (''Sus scrofa'') with fluorocitrate (inhibitor)
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== Classification ==
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*[[1b0m]] - S642 mutant of mAc (''Sus scrofa'') with fluorocitrate (inhibitor)
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TCDB, the most sophisticated classification of transport proteins to date, classifies the major facilitators as family 2.A.1 in the clan of '''secondary active [[porters]]'''.
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*[[1c96]] - S642 mutant of mAc (''Sus scrofa'') with citrate
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*[[1aco]] - mAc (''Bos taurus'') with ''trans''-aconitate (inhibitor)
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== Available structures ==
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*[[1ami]] - mAc (''Bos taurus'') with methylisocitrate
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The family has about 10,000 sequenced members from all living organisms. There are, however, only a few protein structures resolved.
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*[[1amj]] - mAc (''Bos taurus'') with sulfate
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* from ''E. coli'' K12:
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*[[2b3x]] - cAc (human) as aconitase with Fe4S4
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** the [[glycerol-3-phosphate transporter]] ([[1pw4]])
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*[[2b3y]] - cAc (human) as aconitase with Fe4S4 and citrate
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** the [[multidrug resistance protein]] D ([[2gfp]])
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*[[2ipy]] - cAc (human) as IRP1 with feritin RNA
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** the [[Lactose Permease|lactose permease]] ([[1pv7]], [[2cfp]], [[2cfq]], [[2v8n]])
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*[[7acn]] - mAc (''Sus scrofa'') with isocitrate
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== Weblinks ==
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*[http://www.tcdb.org/ The TCDB database]
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*[http://www.tcdb.org/tcdb/subclass2.php?tc=2.A.1 TCDB: 2.A.1 The Major Facilitator Superfamily (MFS)]
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*[http://www.tcdb.org/pdb_structure.php TCDB: Transport proteins with PDB structures]
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Revision as of 17:19, 15 February 2009

  • 1b0j - S642 mutant of mAc (Sus scrofa) with isocitrate (substrate)
  • 1b0k - S642 mutant of mAc (Sus scrofa) with fluorocitrate (inhibitor)
  • 1b0m - S642 mutant of mAc (Sus scrofa) with fluorocitrate (inhibitor)
  • 1c96 - S642 mutant of mAc (Sus scrofa) with citrate
  • 1aco - mAc (Bos taurus) with trans-aconitate (inhibitor)
  • 1ami - mAc (Bos taurus) with methylisocitrate
  • 1amj - mAc (Bos taurus) with sulfate
  • 2b3x - cAc (human) as aconitase with Fe4S4
  • 2b3y - cAc (human) as aconitase with Fe4S4 and citrate
  • 2ipy - cAc (human) as IRP1 with feritin RNA
  • 7acn - mAc (Sus scrofa) with isocitrate
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