This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1a87
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1a87, resolution 3.10Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1a87]], resolution 3.10Å (<scene name='initialview01'>default scene</scene>)}}} |
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01024 Colicin]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01024 Colicin]</span> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1a87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a87 OCA], [http://www.ebi.ac.uk/pdbsum/1a87 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1a87 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1a87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a87 OCA], [http://www.ebi.ac.uk/pdbsum/1a87 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1a87 RCSB]</span> | ||
| Line 7: | Line 7: | ||
|COMPONENT={{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0016020 | text = membrane}} | |COMPONENT={{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0016020 | text = membrane}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1a87002 1A87002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000293 Ipr000293]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01024 PF01024]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43380 d1a87__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P08083 P08083]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1a87002 1A87002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000293 Ipr000293]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01024 PF01024]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43380 d1a87__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P08083 P08083]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1a87_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 19:10, 16 February 2009
| |||||||||
| 1a87, resolution 3.10Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Domains: | Colicin | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

