Template:STRUCTURE 1gnh

From Proteopedia

(Difference between revisions)

Revision as of 03:12, 17 February 2009

1gnh, resolution 3.00Å ()

Ligands:

Domains:

Structural annotation:
Resources:	CATH : 1Gnha00, 1Gnhb00, 1Gnhc00, 1Gnhd00, 1Gnhe00, 1Gnhf00, 1Gnhg00, 1Gnhh00, 1Gnhi00, 1Gnhj00 InterPro : Ipr001759, Ipr013320, Ipr008985 Pfam : PF00354 SCOP : d1gnha_, d1gnhb_, d1gnhc_, d1gnhd_, d1gnhe_, d1gnhf_, d1gnhg_, d1gnhh_, d1gnhi_, d1gnhj_ UniProt : P02741

Functional annotation:
Resources:	GeneCard : CRP
Cellular component:	extracellular region
Biological process:	inflammatory response acute-phase response
Molecular function:	binding calcium ion binding metal ion binding

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1gnh"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1gnh, resolution 3.00&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1gnh]], resolution 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
 |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00152 PTX]</span>
@@ Line 9: / Line 9: @@
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhA00 1Gnha00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhB00 1Gnhb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhC00 1Gnhc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhD00 1Gnhd00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhE00 1Gnhe00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhF00 1Gnhf00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhG00 1Gnhg00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhH00 1Gnhh00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhI00 1Gnhi00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhJ00 1Gnhj00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001759 Ipr001759], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013320 Ipr013320], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008985 Ipr008985]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00354 PF00354]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24252 d1gnha_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24253 d1gnhb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24254 d1gnhc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24255 d1gnhd_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24256 d1gnhe_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24257 d1gnhf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24258 d1gnhg_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24259 d1gnhh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24260 d1gnhi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24261 d1gnhj_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02741 P02741]</span>
 |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=CRP CRP]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1gnh_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1gnh_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1gnh_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1gnh_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>E [x]</text>
+<name>jmb_1gnh_E</name>
+<title>toggle chain E</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>F [x]</text>
+<name>jmb_1gnh_F</name>
+<title>toggle chain F</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>G [x]</text>
+<name>jmb_1gnh_G</name>
+<title>toggle chain G</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>H [x]</text>
+<name>jmb_1gnh_H</name>
+<title>toggle chain H</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>I [x]</text>
+<name>jmb_1gnh_I</name>
+<title>toggle chain I</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>J [x]</text>
+<name>jmb_1gnh_J</name>
+<title>toggle chain J</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1gnh

From Proteopedia

Revision as of 03:12, 17 February 2009

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