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Template:STRUCTURE 1kme
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1kme, resolution 2.00Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1kme]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=GLC:SUGAR+(ALPHA-D-GLUCOSE)'>GLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene> | |LIGAND= <scene name='pdbligand=GLC:SUGAR+(ALPHA-D-GLUCOSE)'>GLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene> | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01036 Bac_rhodopsin]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01036 Bac_rhodopsin]</span> | ||
| Line 8: | Line 8: | ||
|COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0016021 | text = integral to membrane}} | |COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0016021 | text = integral to membrane}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kmeA00 1Kmea00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kmeB00 1Kmeb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001425 Ipr001425]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01036 PF01036]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=68692 d1kmea_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=68693 d1kmeb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02945 P02945]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kmeA00 1Kmea00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1kmeB00 1Kmeb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001425 Ipr001425]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01036 PF01036]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=68692 d1kmea_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=68693 d1kmeb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02945 P02945]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1kme_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_1kme_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 05:42, 17 February 2009
| |||||||||
| 1kme, resolution 2.00Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||||
| Domains: | Bac_rhodopsin | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
