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Template:STRUCTURE 1tdh
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1tdh, resolution 2.10Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1tdh]], resolution 2.10Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene> | |LIGAND= <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene> | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09292 Neil1-DNA_bind], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06831 H2TH], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01149 Fapy_DNA_glyco]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09292 Neil1-DNA_bind], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06831 H2TH], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01149 Fapy_DNA_glyco]</span> | ||
| Line 9: | Line 9: | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010979 Ipr010979], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015886 Ipr015886], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015371 Ipr015371], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015887 Ipr015887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012319 Ipr012319]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01149 PF01149], [http://pfam.sanger.ac.uk/family?acc=PF06831 PF06831], [http://pfam.sanger.ac.uk/family?acc=PF09292 PF09292]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=106772 d1tdha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=106773 d1tdha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=106774 d1tdha3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q96FI4 Q96FI4]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010979 Ipr010979], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015886 Ipr015886], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015371 Ipr015371], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015887 Ipr015887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012319 Ipr012319]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01149 PF01149], [http://pfam.sanger.ac.uk/family?acc=PF06831 PF06831], [http://pfam.sanger.ac.uk/family?acc=PF09292 PF09292]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=106772 d1tdha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=106773 d1tdha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=106774 d1tdha3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q96FI4 Q96FI4]</span> | ||
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=NEIL1 NEIL1]</span> | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=NEIL1 NEIL1]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1tdh_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 07:09, 17 February 2009
| |||||||||
| 1tdh, resolution 2.10Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Domains: | Neil1-DNA_bind, H2TH, Fapy_DNA_glyco | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
