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Template:STRUCTURE 3d87
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|3d87, resolution 2.90Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3d87]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Man+D+1281'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Po4+B+5001'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Po4+D+5002'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+K+D+5003'>AC4</scene> and <scene name='pdbsite=AC5:Binding+Site+For+Residue+K+B+5004'>AC5</scene> | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Man+D+1281'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Po4+B+5001'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Po4+D+5002'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+K+D+5003'>AC4</scene> and <scene name='pdbsite=AC5:Binding+Site+For+Residue+K+B+5004'>AC5</scene> | ||
|LIGAND= <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MAN:SUGAR+(ALPHA-D-MANNOSE)'>MAN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | |LIGAND= <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MAN:SUGAR+(ALPHA-D-MANNOSE)'>MAN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
| Line 7: | Line 7: | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d87 OCA], [http://www.ebi.ac.uk/pdbsum/3d87 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3d87 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d87 OCA], [http://www.ebi.ac.uk/pdbsum/3d87 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3d87 RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9NPF7 Q9NPF7], [http://ca.expasy.org/cgi-bin/niceprot.pl?P29460 P29460]</span> | |SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9NPF7 Q9NPF7], [http://ca.expasy.org/cgi-bin/niceprot.pl?P29460 P29460]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_3d87_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_3d87_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_3d87_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_3d87_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 07:51, 17 February 2009
| |||||||||
| 3d87, resolution 2.90Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | , , , and | ||||||||
| Ligands: | , , | ||||||||
| Gene: | IL23A, SGRF, UNQ2498/PRO5798 (Homo sapiens), IL12B, NKSF2 (Homo sapiens) | ||||||||
| Related: | 1f45, 3d85 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
