Template:STRUCTURE 1bbw

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Revision as of 08:30, 17 February 2009

1bbw, resolution 2.70Å ()

Gene:

LYSS (Escherichia coli)

Activity:

Lysine--tRNA ligase, with EC number 6.1.1.6

Domains:

PRK12445, LysRS_N, LysRS_core

Related:

1bbu

Structural annotation:
Resources:	CATH : 1Bbwa02, 1Bbwa01 InterPro : Ipr004364, Ipr006195, Ipr002313, Ipr012340, Ipr004365 Pfam : PF01336, PF00152 SCOP : d1bbwa2, d1bbwa1 UniProt : P0A8N3

Functional annotation:
Cellular component:	membrane fraction cytoplasm
Biological process:	tRNA aminoacylation for protein translation translation lysyl-tRNA aminoacylation
Molecular function:	nucleotide binding ATP binding metal ion binding aminoacyl-tRNA ligase activity magnesium ion binding ligase activity protein binding nucleic acid binding lysine-tRNA ligase activity

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1bbw"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1bbw, resolution 2.70&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1bbw]], resolution 2.70&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine--tRNA_ligase Lysine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.6 6.1.1.6] </span>
 |GENE= LYSS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
@@ Line 10: / Line 10: @@
 |COMPONENT={{GO|id=GO:0005624 | text = membrane fraction}}{{GO|id=GO:0005737 | text = cytoplasm}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bbwA02 1Bbwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bbwA01 1Bbwa01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004364 Ipr004364], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006195 Ipr006195], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002313 Ipr002313], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012340 Ipr012340], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004365 Ipr004365]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01336 PF01336], [http://pfam.sanger.ac.uk/family?acc=PF00152 PF00152]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=40722 d1bbwa2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=25255 d1bbwa1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A8N3 P0A8N3]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1bbw_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1bbw

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Revision as of 08:30, 17 February 2009

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