Template:STRUCTURE 1hfe

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Revision as of 12:37, 17 February 2009

1hfe, resolution 1.60Å ()

Ligands:

, , , , , ,

Activity:

Ferredoxin hydrogenase, with EC number 1.12.7.2

Domains:

Fe_hyd_SSU, Fer4, Fe_hyd_lg_C, COG2768

Structural annotation:
Resources:	CATH : 1Hfel03, 1Hfel01, 1Hfel02, 1Hfem01, 1Hfem03, 1Hfem02, 1Hfes00, 1Hfet00 InterPro : Ipr009016, Ipr013352, Ipr004108, Ipr001450, Ipr003149, Ipr006311, Ipr008953 Pfam : PF02906, PF00037, PF02256 SCOP : d1hfel1, d1hfel2, d1hfem2, d1hfem1, d1hfes_, d1hfet_ UniProt : P07598, P07603

Functional annotation:
Cellular component:	periplasmic space
Biological process:	transport electron transport
Molecular function:	4 iron, 4 sulfur cluster binding ferredoxin hydrogenase activity iron-sulfur cluster binding electron carrier activity oxidoreductase activity metal ion binding iron ion binding

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1hfe"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1hfe, resolution 1.60&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1hfe]], resolution 1.60&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |LIGAND= <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=PDT:1,3-PROPANEDITHIOL'>PDT</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
 |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin_hydrogenase Ferredoxin hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.7.2 1.12.7.2] </span>
@@ Line 9: / Line 9: @@
 |COMPONENT={{GO|id=GO:0042597 | text = periplasmic space}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL03 1Hfel03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL01 1Hfel01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeL02 1Hfel02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM01 1Hfem01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM03 1Hfem03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeM02 1Hfem02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeS00 1Hfes00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1hfeT00 1Hfet00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009016 Ipr009016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013352 Ipr013352], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004108 Ipr004108], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001450 Ipr001450], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003149 Ipr003149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008953 Ipr008953]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02906 PF02906], [http://pfam.sanger.ac.uk/family?acc=PF00037 PF00037], [http://pfam.sanger.ac.uk/family?acc=PF02256 PF02256]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36018 d1hfel1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39001 d1hfel2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39002 d1hfem2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36019 d1hfem1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19640 d1hfes_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19641 d1hfet_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P07598 P07598], [http://ca.expasy.org/cgi-bin/niceprot.pl?P07603 P07603]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1hfe_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1hfe_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1hfe_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1hfe_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1hfe

From Proteopedia

Revision as of 12:37, 17 February 2009

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