Template:STRUCTURE 1g1r

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Revision as of 13:39, 17 February 2009

1g1r, resolution 3.40Å ()

Ligands:

Non-Standard Residues:

, , ,

Domains:

EGF_CA, CLECT_selectins_like

Related:

1g1q, 1g1s, 1g1t

Structural annotation:
Resources:	CATH : 1G1Ra02, 1G1Ra01, 1G1Rb01, 1G1Rb02, 1G1Rc01, 1G1Rc02, 1G1Rd02, 1G1Rd01 InterPro : Ipr006210, Ipr002396, Ipr013032, Ipr000436, Ipr006209, Ipr001304, Ipr000742 Pfam : PF00008, PF00059 SCOP : d1g1ra1, d1g1ra2, d1g1rb2, d1g1rb1, d1g1rc1, d1g1rc2, d1g1rd2, d1g1rd1 UniProt : P16109

Functional annotation:
Resources:	GeneCard : SELP
Cellular component:	integral to membrane membrane plasma membrane membrane fraction integral to plasma membrane platelet alpha granule membrane soluble fraction
Biological process:	cell adhesion
Molecular function:	sugar binding protein binding carbohydrate binding

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1g1r"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1g1r, resolution 3.40&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1g1r]], resolution 3.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>
 |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>
@@ Line 11: / Line 11: @@
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>
 |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=SELP SELP]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1g1r_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1g1r_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1g1r_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1g1r_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1g1r

From Proteopedia

Revision as of 13:39, 17 February 2009

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