Template:STRUCTURE 2e9s
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2e9s, resolution 1.78Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2e9s]], resolution 1.78Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:No3+Binding+Site+For+Residue+A+601'>AC1</scene>, <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+A+603'>AC2</scene>, <scene name='pdbsite=AC3:Mg+Binding+Site+For+Residue+B+703'>AC3</scene>, <scene name='pdbsite=AC4:Gdp+Binding+Site+For+Residue+A+602'>AC4</scene>, <scene name='pdbsite=AC5:Gdp+Binding+Site+For+Residue+B+702'>AC5</scene> and <scene name='pdbsite=AC6:Gdp+Binding+Site+For+Residue+C+802'>AC6</scene> | |SITE= <scene name='pdbsite=AC1:No3+Binding+Site+For+Residue+A+601'>AC1</scene>, <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+A+603'>AC2</scene>, <scene name='pdbsite=AC3:Mg+Binding+Site+For+Residue+B+703'>AC3</scene>, <scene name='pdbsite=AC4:Gdp+Binding+Site+For+Residue+A+602'>AC4</scene>, <scene name='pdbsite=AC5:Gdp+Binding+Site+For+Residue+B+702'>AC5</scene> and <scene name='pdbsite=AC6:Gdp+Binding+Site+For+Residue+C+802'>AC6</scene> | ||
|LIGAND= <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene> | |LIGAND= <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene> | ||
| Line 8: | Line 8: | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e9s OCA], [http://www.ebi.ac.uk/pdbsum/2e9s PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2e9s RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e9s OCA], [http://www.ebi.ac.uk/pdbsum/2e9s PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2e9s RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003579 Ipr003579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013753 Ipr013753], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001806 Ipr001806], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015600 Ipr015600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005225 Ipr005225]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00071 PF00071]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9NRW1 Q9NRW1]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003579 Ipr003579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013753 Ipr013753], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001806 Ipr001806], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015600 Ipr015600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005225 Ipr005225]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00071 PF00071]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9NRW1 Q9NRW1]</span> | ||
| - | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id= | + | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=RAB6B RAB6B]</span> |
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2e9s_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_2e9s_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_2e9s_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 13:56, 17 February 2009
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| 2e9s, resolution 1.78Å () | |||||||||
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| Sites: | , , , , and | ||||||||
| Ligands: | , , | ||||||||
| Gene: | RAB6B (Homo sapiens) | ||||||||
| Domains: | Rab6 | ||||||||
| Related: | 2fe4, 2ffq | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
