This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 2cdn
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2cdn, resolution 1.90Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2cdn]], resolution 1.90Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Adp+Binding+Site+For+Chain+A'>AC1</scene> | |SITE= <scene name='pdbsite=AC1:Adp+Binding+Site+For+Chain+A'>AC1</scene> | ||
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | ||
| Line 10: | Line 10: | ||
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | |COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2cdnA00 2Cdna00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000850 Ipr000850], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006259 Ipr006259], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011769 Ipr011769]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00406 PF00406]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P69440 P69440]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2cdnA00 2Cdna00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000850 Ipr000850], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006259 Ipr006259], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011769 Ipr011769]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00406 PF00406]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P69440 P69440]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2cdn_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 14:00, 17 February 2009
| |||||||||
| 2cdn, resolution 1.90Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | |||||||||
| Ligands: | , | ||||||||
| Activity: | Adenylate kinase, with EC number 2.7.4.3 | ||||||||
| Domains: | ADK, Adk | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
