Template:STRUCTURE 2ia6
From Proteopedia
(Difference between revisions)
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- | {{ | + | {{Structure |
- | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2ia6, resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2ia6]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Po4+D+1919'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Po4+D+1920'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Ca+A+403'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Ca+A+404'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Ca+B+502'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Ca+B+503'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Ca+B+504'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Edo+C+605'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+C+606'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Edo+C+607'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Bap+D+2906'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Bap+F+2906'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Edo+F+602'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Atp+A+401'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Atp+B+501'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Gol+E+601'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Gol+F+604'>BC8</scene> and <scene name='pdbsite=BC9:Binding+Site+For+Residue+Gol+B+603'>BC9</scene> | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Po4+D+1919'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Po4+D+1920'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Ca+A+403'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Ca+A+404'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Ca+B+502'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Ca+B+503'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Ca+B+504'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Edo+C+605'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+C+606'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Edo+C+607'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Bap+D+2906'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Bap+F+2906'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Edo+F+602'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Atp+A+401'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Atp+B+501'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Gol+E+601'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Gol+F+604'>BC8</scene> and <scene name='pdbsite=BC9:Binding+Site+For+Residue+Gol+B+603'>BC9</scene> | ||
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | |LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
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|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | |COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001126 Ipr001126]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00817 PF00817]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q97W02 Q97W02]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001126 Ipr001126]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00817 PF00817]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q97W02 Q97W02]</span> | ||
+ | |CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_2ia6_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>B [x]</text> | ||
+ | <name>jmb_2ia6_B</name> | ||
+ | <title>toggle chain B</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>C [x]</text> | ||
+ | <name>jmb_2ia6_C</name> | ||
+ | <title>toggle chain C</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>E [x]</text> | ||
+ | <name>jmb_2ia6_E</name> | ||
+ | <title>toggle chain E</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>D [x]</text> | ||
+ | <name>jmb_2ia6_D</name> | ||
+ | <title>toggle chain D</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>F [x]</text> | ||
+ | <name>jmb_2ia6_F</name> | ||
+ | <title>toggle chain F</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Revision as of 15:07, 17 February 2009
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2ia6, resolution 2.50Å () | |||||||||
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Sites: | , , , , , , , , , , , , , , , , and | ||||||||
Ligands: | , , , , , | ||||||||
Gene: | dbh, dpo4 (Sulfolobus solfataricus P2) | ||||||||
Activity: | DNA-directed DNA polymerase, with EC number 2.7.7.7 | ||||||||
Domains: | Pol_IV_kappa | ||||||||
Related: | 2ibk | ||||||||
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Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
Coordinates: | save as pdb, mmCIF, xml |