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Template:STRUCTURE 1g28

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Revision as of 07:47, 18 February 2009

1g28, resolution 2.73Å ()

Ligands:

Gene:

PHY3 (Eukaryota)

Domains:

PAS, PAC

Structural annotation:
Resources:	CATH : 1G28A00, 1G28B00, 1G28C00, 1G28D00 InterPro : Ipr003018, Ipr001294, Ipr002290, Ipr000719, Ipr013515, Ipr013654, Ipr013516, Ipr000700, Ipr013655, Ipr011009, Ipr001610, Ipr008271, Ipr000014 Pfam : PF08447 SCOP : d1g28a_, d1g28b_, d1g28c_, d1g28d_ UniProt : Q9ZWQ6

Functional annotation:
Biological process:	sensory perception regulation of transcription protein-chromophore linkage protein amino acid phosphorylation two-component signal transduction system (phosphorelay) signal transduction regulation of transcription, DNA-dependent
Molecular function:	nucleotide binding receptor activity signal transducer activity G-protein coupled photoreceptor activity ATP binding protein serine/threonine kinase activity two-component sensor activity transferase activity protein kinase activity photoreceptor activity kinase activity

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1g28"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1g28, resolution 2.73&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1g28]], resolution 2.73&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |LIGAND= <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>
 |GENE= PHY3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2759 Eukaryota])
@@ Line 8: / Line 8: @@
 |PROCESS={{GO|id=GO:0007600 | text = sensory perception}}{{GO|id=GO:0045449 | text = regulation of transcription}}{{GO|id=GO:0018298 | text = protein-chromophore linkage}}{{GO|id=GO:0006468 | text = protein amino acid phosphorylation}}{{GO|id=GO:0000160 | text = two-component signal transduction system (phosphorelay)}}{{GO|id=GO:0007165 | text = signal transduction}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28A00 1G28A00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28B00 1G28B00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28C00 1G28C00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g28D00 1G28D00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003018 Ipr003018], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001294 Ipr001294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002290 Ipr002290], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013515 Ipr013515], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013654 Ipr013654], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013516 Ipr013516], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008271 Ipr008271], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF08447 PF08447]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60216 d1g28a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60217 d1g28b_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60218 d1g28c_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60219 d1g28d_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9ZWQ6 Q9ZWQ6]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1g28_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1g28_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1g28_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1g28_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1g28

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Revision as of 07:47, 18 February 2009

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