User:Jaime Prilusky/Sandbox BU
From Proteopedia
(Difference between revisions)
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Testing the '''Protein Assemblies''' generated by [http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html PISA]: Protein interfaces, surfaces and assemblies service PISA at European Bioinformatics Institute, authored by E. Krissinel and K. Henrick. | Testing the '''Protein Assemblies''' generated by [http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html PISA]: Protein interfaces, surfaces and assemblies service PISA at European Bioinformatics Institute, authored by E. Krissinel and K. Henrick. | ||
| - | In order to load and display a structure, the value for the ''load='' parameter determines what it will be shown: | + | In order to load and display a structure, the value for the ''load='' parameter determines what it will be shown: |
| - | <nowiki>load='2ace'</nowiki> displays the default PDB structure | + | * <nowiki>load='2ace'</nowiki> displays the default PDB structure |
| - | <nowiki>load='2ace/1'</nowiki> displays the first Assembly calculated by PISA | + | * <nowiki>load='2ace/1'</nowiki> displays the first Assembly calculated by PISA |
| + | * <nowiki>load='2ace/n'</nowiki> displays the ''n'' Assembly calculated by PISA | ||
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Revision as of 10:22, 24 February 2009
Testing the Protein Assemblies generated by PISA: Protein interfaces, surfaces and assemblies service PISA at European Bioinformatics Institute, authored by E. Krissinel and K. Henrick.
In order to load and display a structure, the value for the load= parameter determines what it will be shown:
- load='2ace' displays the default PDB structure
- load='2ace/1' displays the first Assembly calculated by PISA
- load='2ace/n' displays the n Assembly calculated by PISA
- Krissinel E, Henrick K. Inference of macromolecular assemblies from crystalline state. J Mol Biol. 2007 Sep 21;372(3):774-97. Epub 2007 May 13. PMID:17681537 doi:10.1016/j.jmb.2007.05.022
