Template:STRUCTURE 2q66
From Proteopedia
(Difference between revisions)
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{{Structure | {{Structure | ||
- | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2q66]], resolution 1.80Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2q66]], [[Resolution | resolution]] 1.80Å (<scene name='initialview01'>default scene</scene>)}}} |
+ | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Mg+A+602'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Atp+A+605'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Edo+A+701'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Edo+A+702'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Edo+A+703'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Edo+A+704'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Edo+A+705'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Edo+A+706'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+A+707'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Edo+A+708'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Edo+X+709'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Edo+A+710'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Edo+A+711'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Edo+A+712'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Edo+A+713'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Edo+A+714'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Edo+X+715'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Edo+A+716'>BC9</scene> and <scene name='pdbsite=CC1:Binding+Site+For+Residue+Edo+A+717'>CC1</scene> | ||
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | |LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span> | ||
|GENE= PAP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]) | |GENE= PAP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]) | ||
- | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01377 MYSc_type_II], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02736 Myosin_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01576 Myosin_tail_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1196 Smc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04926 PAP_RNA-bind], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01909 NTP_transf_2], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5186 PAP1]</span> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q66 OCA], [http://www.ebi.ac.uk/pdbsum/2q66 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2q66 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q66 OCA], [http://www.ebi.ac.uk/pdbsum/2q66 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2q66 RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002934 Ipr002934], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007010 Ipr007010], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011068 Ipr011068], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014492 Ipr014492], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007012 Ipr007012]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF04926 PF04926], [http://pfam.sanger.ac.uk/family?acc=PF04928 PF04928], [http://pfam.sanger.ac.uk/family?acc=PF01909 PF01909]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P29468 P29468]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002934 Ipr002934], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007010 Ipr007010], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011068 Ipr011068], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014492 Ipr014492], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007012 Ipr007012]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF04926 PF04926], [http://pfam.sanger.ac.uk/family?acc=PF04928 PF04928], [http://pfam.sanger.ac.uk/family?acc=PF01909 PF01909]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P29468 P29468]</span> | ||
- | |CONSURF={{!}}- | + | |uPDB=2Q66|CONSURF={{!}}- |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
Line 19: | Line 19: | ||
<name>jmb_2q66_A</name> | <name>jmb_2q66_A</name> | ||
<title>toggle chain A</title> | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>B [x]</text> | ||
+ | <name>jmb_2q66_B</name> | ||
+ | <title>toggle chain B</title> | ||
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> |
Revision as of 08:26, 23 April 2009
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2q66, resolution 1.80Å () | |||||||||
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Sites: | , , , , , , , , , , , , , , , , , and | ||||||||
Ligands: | , , | ||||||||
Gene: | PAP1 (Saccharomyces cerevisiae) | ||||||||
Activity: | Polynucleotide adenylyltransferase, with EC number 2.7.7.19 | ||||||||
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Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
Coordinates: | save as pdb, mmCIF, xml |