This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 1fkn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1fkn]], resolution 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1fkn]], [[Resolution | resolution]] 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 +
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Lol+C+4'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Alq+C+5'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Lol+D+4'>AC3</scene> and <scene name='pdbsite=AC4:Binding+Site+For+Residue+Alq+D+5'>AC4</scene>
 +
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00026 Asp]</span>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00026 Asp]</span>
|NONSTDRES=<scene name='pdbligand=ALQ:2-METHYL-PROPIONIC+ACID'>ALQ</scene>, <scene name='pdbligand=LOL:LEUCINOL'>LOL</scene>
|NONSTDRES=<scene name='pdbligand=ALQ:2-METHYL-PROPIONIC+ACID'>ALQ</scene>, <scene name='pdbligand=LOL:LEUCINOL'>LOL</scene>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fkn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fkn OCA], [http://www.ebi.ac.uk/pdbsum/1fkn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1fkn RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fkn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fkn OCA], [http://www.ebi.ac.uk/pdbsum/1fkn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1fkn RCSB]</span>
-
|SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56817 P56817]</span>
+
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1fknA01 1Fkna01], [http://www.cathdb.info/domain/1fknA02 1Fkna02], [http://www.cathdb.info/domain/1fknB01 1Fknb01], [http://www.cathdb.info/domain/1fknB02 1Fknb02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001969 Ipr001969], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009119 Ipr009119], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009120 Ipr009120], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009007 Ipr009007], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001461 Ipr001461]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00026 PF00026]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=26879 d1fkna_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=26880 d1fknb_]<br>UniProt : [http://www.uniprot.org/uniprot/P56817 P56817]</span>
-
|CONSURF={{!}}-
+
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=BACE1 BACE1]</span>
 +
|uPDB=1FKN|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Revision as of 06:11, 6 May 2009

Drag the structure with the mouse to rotate
1fkn, resolution 1.90Å ()
Sites: , , and
Non-Standard Residues: ,
Activity: Memapsin 2, with EC number 3.4.23.46
Domains: Asp
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools