This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
User:Michael Strong/H1N1/PB1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Michael Strong (Talk | contribs)
(New page: <pre> >gb|AAO88267.1|AF342823_1 PB1 [Influenza A virus (A/Wisconsin/10/98 (H1N1))] Length=757 Score = 1575 bits (4077), Expect = 0.0, Method: Compositional matrix adjust. Identities ...)
Next diff →
Revision as of 22:02, 7 May 2009


>gb|AAO88267.1|AF342823_1  PB1 [Influenza A virus (A/Wisconsin/10/98 (H1N1))]
Length=757

 Score = 1575 bits (4077),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 745/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAL87925.1|AF455727_1  polymerase subunit [Influenza A virus (A/Swine/Iowa/930/01(H1N2))]
Length=757

 Score = 1573 bits (4073),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR++FESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIEFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABA46964.1|  PB1 [Influenza A virus (A/swine/Minnesota/00395/2004(H3N1))]
Length=757

 Score = 1573 bits (4072),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDE+MYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDERMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABP49379.1|  polymerase PB1 [Influenza A virus (A/South Australia/11/2000(H3N2))]
Length=757

 Score = 1572 bits (4071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG48024.1|  polymerase PB1 [Influenza A virus (A/New York/727/1994(H3N2))]
 gb|ABG88473.1|  polymerase PB1 [Influenza A virus (A/New York/736/1994(H3N2))]
Length=757

 Score = 1572 bits (4071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG37282.1|  polymerase PB1 [Influenza A virus (A/New York/665/1994(H3N2))]
 gb|ABG79982.1|  polymerase PB1 [Influenza A virus (A/New York/661/1994(H3N2))]
 gb|ABK40664.1|  polymerase PB1 [Influenza A virus (A/New York/681/1995(H3N2))]
Length=757

 Score = 1572 bits (4071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSVAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAF76001.1|AF250130_1  polymerase subunit PB1 [influenza A virus (A/Swine/Indiana/9K035/99 
(H1N2))]
Length=757

 Score = 1572 bits (4071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKG+WTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR++KRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVDKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQ+KYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQRKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG47969.1|  polymerase PB1 [Influenza A virus (A/New York/716/1994(H3N2))]
 gb|ABG88462.1|  polymerase PB1 [Influenza A virus (A/New York/735/1994(H3N2))]
Length=757

 Score = 1572 bits (4070),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 744/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG26898.1|  polymerase PB1 [Influenza A virus (A/New York/698/1995(H3N2))]
 gb|ABG26909.1|  polymerase PB1 [Influenza A virus (A/New York/702/1995(H3N2))]
 gb|ABG37172.1|  polymerase PB1 [Influenza A virus (A/New York/632/1996(H3N2))]
 13 more sequence titles
 gb|ABG37249.1|  polymerase PB1 [Influenza A virus (A/New York/658/1995(H3N2))]
 gb|ABG37260.1|  polymerase PB1 [Influenza A virus (A/New York/659/1994(H3N2))]
 gb|ABG37293.1|  polymerase PB1 [Influenza A virus (A/New York/669/1995(H3N2))]
 gb|ABG37315.1|  polymerase PB1 [Influenza A virus (A/New York/672/1995(H3N2))]
 gb|ABG37337.1|  polymerase PB1 [Influenza A virus (A/New York/679/1995(H3N2))]
 gb|ABG47881.1|  polymerase PB1 [Influenza A virus (A/New York/684/1995(H3N2))]
 gb|ABG47914.1|  polymerase PB1 [Influenza A virus (A/New York/689/1995(H3N2))]
 gb|ABG67176.1|  polymerase PB1 [Influenza A virus (A/New York/670/1995(H3N2))]
 gb|ABG80015.1|  polymerase PB1 [Influenza A virus (A/New York/666/1995(H3N2))]
 gb|ABG80059.1|  polymerase PB1 [Influenza A virus (A/New York/691/1995(H3N2))]
 gb|ABG88363.1|  polymerase PB1 [Influenza A virus (A/New York/673/1995(H3N2))]
 gb|ABG88374.1|  polymerase PB1 [Influenza A virus (A/New York/683/1995(H3N2))]
 gb|ABG88396.1|  polymerase PB1 [Influenza A virus (A/New York/690/1995(H3N2))]
Length=757

 Score = 1572 bits (4070),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABI20911.1|  polymerase PB1 [Influenza A virus (A/New York/688/1994(H3N2))]
Length=757

 Score = 1571 bits (4069),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIG+TVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGITVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG79993.1|  polymerase PB1 [Influenza A virus (A/New York/663/1994(H3N2))]
Length=757

 Score = 1571 bits (4069),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPE+CLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEICLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB80237.1|  polymerase PB1 [Influenza A virus (A/New York/521/1998(H3N2))]
Length=757

 Score = 1571 bits (4069),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSVAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACE78124.1|  polymerase PB1 [Influenza A virus (A/swine/Korea/CY10/2007(H3N2))]
Length=757

 Score = 1571 bits (4068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAE+LASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEVLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALI+NAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIINAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACD65218.1|  polymerase PB1 [Influenza A virus (A/swine/Ohio/75004/04(H1N1))]
Length=757

 Score = 1571 bits (4068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRMNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            +MK+RTQIPAEMLASIDLKYFNE T+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  KMKLRTQIPAEMLASIDLKYFNEPTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMP+HGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPSHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80114.1|  polymerase PB1 [Influenza A virus (A/New York/713/1994(H3N2))]
Length=757

 Score = 1571 bits (4068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFVKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG67187.1|  polymerase PB1 [Influenza A virus (A/New York/675/1995(H3N2))]
Length=757

 Score = 1571 bits (4068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSVAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISS+VEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSLVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAC63409.1|  PB1 polymerase subunit [Influenza A virus H3N2]
 gb|AAC63411.1|  PB1 polymerase subunit [Influenza A virus H3N2]
 gb|AAC63412.1|  PB1 polymerase subunit [Influenza A virus H3N2]
 217 more sequence titles
 gb|AAC63453.1|  PB1 polymerase subunit [Influenza A virus H3N2]
 gb|AAY46424.1|  polymerase PB1 [Influenza A virus (A/New York/240/1998(H3N2))]
 gb|AAY46434.1|  polymerase PB1 [Influenza A virus (A/New York/249/1998(H3N2))]
 gb|AAY64290.1|  polymerase PB1 [Influenza A virus (A/New York/262/1999(H3N2))]
 gb|AAY64330.1|  polymerase PB1 [Influenza A virus (A/New York/256/1998(H3N2))]
 gb|AAY64380.1|  polymerase PB1 [Influenza A virus (A/New York/284/1999(H3N2))]
 gb|AAY64390.1|  polymerase PB1 [Influenza A virus (A/New York/286/1999(H3N2))]
 gb|AAY98045.1|  polymerase PB1 [Influenza A virus (A/New York/255/1999(H3N2))]
 gb|AAY98055.1|  polymerase PB1 [Influenza A virus (A/New York/257/1999(H3N2))]
 gb|AAY98095.1|  polymerase PB1 [Influenza A virus (A/New York/277/1999(H3N2))]
 gb|AAY98105.1|  polymerase PB1 [Influenza A virus (A/New York/279/1999(H3N2))]
 gb|AAY98135.1|  polymerase PB1 [Influenza A virus (A/New York/288/1999(H3N2))]
 gb|AAY98155.1|  polymerase PB1 [Influenza A virus (A/New York/290/1999(H3N2))]
 gb|AAY98165.1|  polymerase PB1 [Influenza A virus (A/New York/304/1998(H3N2))]
 gb|AAY98175.1|  polymerase PB1 [Influenza A virus (A/New York/311/1999(H3N2))]
 gb|AAY98205.1|  polymerase PB1 [Influenza A virus (A/New York/314/1999(H3N2))]
 gb|AAY98215.1|  polymerase PB1 [Influenza A virus (A/New York/317/1999(H3N2))]
 gb|AAY98245.1|  polymerase PB1 [Influenza A virus (A/New York/318/1999(H3N2))]
 gb|AAY98255.1|  polymerase PB1 [Influenza A virus (A/New York/321/1999(H3N2))]
 gb|AAY98337.1|  polymerase PB1 [Influenza A virus (A/New York/327/1999(H3N2))]
 gb|AAY98347.1|  polymerase PB1 [Influenza A virus (A/New York/329/1999(H3N2))]
 gb|AAY98364.1|  polymerase PB1 [Influenza A virus (A/New York/333/1999(H3N2))]
 gb|AAY98394.1|  polymerase PB1 [Influenza A virus (A/New York/337/1999(H3N2))]
 gb|AAY98414.1|  polymerase PB1 [Influenza A virus (A/New York/340/1999(H3N2))]
 gb|AAY98778.1|  polymerase PB1 [Influenza A virus (A/New York/248/1999(H3N2))]
 gb|AAZ38492.1|  polymerase PB1 [Influenza A virus (A/New York/331/1999(H3N2))]
 gb|AAZ38503.1|  polymerase PB1 [Influenza A virus (A/New York/332/1999(H3N2))]
 gb|AAZ38569.1|  polymerase PB1 [Influenza A virus (A/New York/260/1999(H3N2))]
 gb|AAZ74371.1|  polymerase PB1 [Influenza A virus (A/New York/283/1999(H3N2))]
 gb|AAZ74394.1|  polymerase PB1 [Influenza A virus (A/New York/254/1998(H3N2))]
 gb|AAZ74438.1|  polymerase PB1 [Influenza A virus (A/New York/285/1999(H3N2))]
 gb|AAZ74570.1|  polymerase PB1 [Influenza A virus (A/New York/347/1999(H3N2))]
 gb|AAZ74592.1|  polymerase PB1 [Influenza A virus (A/New York/398/1999(H3N2))]
 gb|AAZ79568.1|  polymerase PB1 [Influenza A virus (A/New York/325/1999(H3N2))]
 gb|AAZ79579.1|  polymerase PB1 [Influenza A virus (A/New York/328/1998(H3N2))]
 gb|AAZ79590.1|  polymerase PB1 [Influenza A virus (A/New York/330/1998(H3N2))]
 gb|AAZ83274.1|  polymerase PB1 [Influenza A virus (A/New York/252/1999(H3N2))]
 gb|AAZ83285.1|  polymerase PB1 [Influenza A virus (A/New York/261/1999(H3N2))]
 gb|AAZ83331.1|  polymerase PB1 [Influenza A virus (A/New York/339/1999(H3N2))]
 gb|ABB02966.1|  polymerase PB1 [Influenza A virus (A/New York/449/1999(H3N2))]
 gb|ABB02977.1|  polymerase PB1 [Influenza A virus (A/New York/450/1999(H3N2))]
 gb|ABB02988.1|  polymerase PB1 [Influenza A virus (A/New York/451/1999(H3N2))]
 gb|ABB02999.1|  polymerase PB1 [Influenza A virus (A/New York/453/1999(H3N2))]
 gb|ABB03010.1|  polymerase PB1 [Influenza A virus (A/New York/454/1999(H3N2))]
 gb|ABB03032.1|  polymerase PB1 [Influenza A virus (A/New York/457/1999(H3N2))]
 gb|ABB03054.1|  polymerase PB1 [Influenza A virus (A/New York/459/1999(H3N2))]
 gb|ABB04914.1|  polymerase PB1 [Influenza A virus (A/Hong Kong/14/92(H3N2))]
 gb|ABB04969.1|  polymerase PB1 [Influenza A virus (A/Nanchang/0074/94(H3N2))]
 gb|ABB46433.1|  polymerase PB1 [Influenza A virus (A/New York/455/1999(H3N2))]
 gb|ABB53704.1|  polymerase PB1 [Influenza A virus (A/New York/397/1999(H3N2))]
 gb|ABB60015.1|  polymerase PB1 [Influenza A virus (A/New York/517/1998(H3N2))]
 gb|ABB79818.1|  polymerase PB1 [Influenza A virus (A/Nanchang/A2/94(H3N2))]
 gb|ABB79976.1|  polymerase PB1 [Influenza A virus (A/Nanchang/58/93(H3N2))]
 gb|ABB80156.1|  polymerase PB1 [Influenza A virus (A/New York/501/1997(H3N2))]
 gb|ABB80226.1|  polymerase PB1 [Influenza A virus (A/New York/528/1998(H3N2))]
 gb|ABB80649.1|  polymerase PB1 [Influenza A virus (A/New York/532/1998(H3N2))]
 gb|ABB80669.1|  polymerase PB1 [Influenza A virus (A/New York/533/1998(H3N2))]
 gb|ABB80712.1|  polymerase PB1 [Influenza A virus (A/New York/545/1997(H3N2))]
 gb|ABC02307.1|  polymerase PB1 [Influenza A virus (A/New York/538/1998(H3N2))]
 gb|ABC54676.1|  polymerase PB1 [Influenza A virus (A/New York/326/1999(H3N2))]
 gb|ABC67880.1|  polymerase PB1 [Influenza A virus (A/Canterbury/42/2000(H3N2))]
 gb|ABC68230.1|  polymerase PB1 [Influenza A virus (A/Canterbury/39/2000(H3N2))]
 gb|ABC68241.1|  polymerase PB1 [Influenza A virus (A/Nanchang/A1/94(H3N2))]
 gb|ABC84568.1|  polymerase PB1 [Influenza A virus (A/Canterbury/88/2000(H3N2))]
 gb|ABC84579.1|  polymerase PB1 [Influenza A virus (A/Canterbury/99/2000(H3N2))]
 gb|ABC85762.1|  polymerase PB1 [Influenza A virus (A/Canterbury/73/2000(H3N2))]
 gb|ABC85784.1|  polymerase PB1 [Influenza A virus (A/Canterbury/38/2000(H3N2))]
 gb|ABC85795.1|  polymerase PB1 [Influenza A virus (A/Canterbury/17/2000(H3N2))]
 gb|ABD15589.1|  polymerase PB1 [Influenza A virus (A/New York/529/1998(H3N2))]
 gb|ABD15688.1|  polymerase PB1 [Influenza A virus (A/Canterbury/103/2000(H3N2))]
 gb|ABD15710.1|  polymerase PB1 [Influenza A virus (A/Canterbury/89/2000(H3N2))]
 gb|ABD15732.1|  polymerase PB1 [Influenza A virus (A/Canterbury/85/2000(H3N2))]
 gb|ABD15776.1|  polymerase PB1 [Influenza A virus (A/Canterbury/71/2000(H3N2))]
 gb|ABD15787.1|  polymerase PB1 [Influenza A virus (A/Canterbury/66/2000(H3N2))]
 gb|ABD15798.1|  polymerase PB1 [Influenza A virus (A/Canterbury/68/2000(H3N2))]
 gb|ABD16300.1|  polymerase PB1 [Influenza A virus (A/Canterbury/56/2000(H3N2))]
 gb|ABD60809.1|  polymerase PB1 [Influenza A virus (A/Nanchang/12/93(H3N2))]
 gb|ABD61323.1|  polymerase PB1 [Influenza A virus (A/Canterbury/87/2000(H3N2))]
 gb|ABD61389.1|  polymerase PB1 [Influenza A virus (A/Canterbury/64/2000(H3N2))]
 gb|ABD61400.1|  polymerase PB1 [Influenza A virus (A/Canterbury/67/2000(H3N2))]
 gb|ABD77628.1|  polymerase PB1 [Influenza A virus (A/West Coast/32/2001(H3N2))]
 gb|ABD77639.1|  polymerase PB1 [Influenza A virus (A/Canterbury/37/2001(H3N2))]
 gb|ABD77650.1|  polymerase PB1 [Influenza A virus (A/Canterbury/44/2001(H3N2))]
 gb|ABD77661.1|  polymerase PB1 [Influenza A virus (A/West Coast/55/2001(H3N2))]
 gb|ABD77760.1|  polymerase PB1 [Influenza A virus (A/West Coast/28/2001(H3N2))]
 gb|ABD77771.1|  polymerase PB1 [Influenza A virus (A/Canterbury/43/2001(H3N2))]
 gb|ABD77859.1|  polymerase PB1 [Influenza A virus (A/New York/580/1996(H3N2))]
 gb|ABD77881.1|  polymerase PB1 [Influenza A virus (A/New York/586/1996(H3N2))]
 gb|ABD77892.1|  polymerase PB1 [Influenza A virus (A/New York/588/1996(H3N2))]
 gb|ABD77903.1|  polymerase PB1 [Influenza A virus (A/New York/589/1996(H3N2))]
 gb|ABD77914.1|  polymerase PB1 [Influenza A virus (A/New York/597/1997(H3N2))]
 gb|ABD78134.1|  polymerase PB1 [Influenza A virus (A/New York/593/1996(H3N2))]
 gb|ABD94841.1|  polymerase PB1 [Influenza A virus (A/New York/562/1996(H3N2))]
 gb|ABD94863.1|  polymerase PB1 [Influenza A virus (A/New York/567/1996(H3N2))]
 gb|ABE13337.1|  polymerase PB1 [Influenza A virus (A/New York/578/1996(H3N2))]
 gb|ABE13563.1|  polymerase PB1 [Influenza A virus (A/New York/603/1996(H3N2))]
 gb|ABE13647.1|  polymerase PB1 [Influenza A virus (A/New York/611/1995(H3N2))]
 gb|ABE13682.1|  polymerase PB1 [Influenza A virus (A/New York/612/1995(H3N2))]
 gb|ABE13865.1|  polymerase PB1 [Influenza A virus (A/New York/613/1996(H3N2))]
 gb|ABE14027.1|  polymerase PB1 [Influenza A virus (A/New York/618/1995(H3N2))]
 gb|ABE14071.1|  polymerase PB1 [Influenza A virus (A/New York/628/1995(H3N2))]
 gb|ABF47624.1|  polymerase PB1 [Influenza A virus (A/New York/623/1995(H3N2))]
 gb|ABF47910.1|  polymerase PB1 [Influenza A virus (A/Wellington/9/2000(H3N2))]
 gb|ABF82714.1|  polymerase PB1 [Influenza A virus (A/New York/602/1996(H3N2))]
 gb|ABG26766.1|  polymerase PB1 [Influenza A virus (A/New York/557/1996(H3N2))]
 gb|ABG26931.1|  polymerase PB1 [Influenza A virus (A/New York/708/1994(H3N2))]
 gb|ABG37161.1|  polymerase PB1 [Influenza A virus (A/New York/624/1996(H3N2))]
 gb|ABG37183.1|  polymerase PB1 [Influenza A virus (A/New York/635/1996(H3N2))]
 gb|ABG37359.1|  polymerase PB1 [Influenza A virus (A/New York/751/1993(H3N2))]
 gb|ABG47925.1|  polymerase PB1 [Influenza A virus (A/New York/709/1994(H3N2))]
 gb|ABG47936.1|  polymerase PB1 [Influenza A virus (A/New York/711/1994(H3N2))]
 gb|ABG47947.1|  polymerase PB1 [Influenza A virus (A/New York/712/1993(H3N2))]
 gb|ABG47980.1|  polymerase PB1 [Influenza A virus (A/New York/719/1994(H3N2))]
 gb|ABG48002.1|  polymerase PB1 [Influenza A virus (A/New York/721/1994(H3N2))]
 gb|ABG48013.1|  polymerase PB1 [Influenza A virus (A/New York/726/1994(H3N2))]
 gb|ABG48035.1|  polymerase PB1 [Influenza A virus (A/New York/728/1994(H3N2))]
 gb|ABG48046.1|  polymerase PB1 [Influenza A virus (A/New York/752/1993(H3N2))]
 gb|ABG48068.1|  polymerase PB1 [Influenza A virus (A/Waikato/5/2000(H3N2))]
 gb|ABG48079.1|  polymerase PB1 [Influenza A virus (A/Waikato/1/2001(H3N2))]
 gb|ABG48310.1|  polymerase PB1 [Influenza A virus (A/New York/759/1993(H3N2))]
 gb|ABG48321.1|  polymerase PB1 [Influenza A virus (A/New York/760/1993(H3N2))]
 gb|ABG48343.1|  polymerase PB1 [Influenza A virus (A/New York/762/1993(H3N2))]
 gb|ABG48354.1|  polymerase PB1 [Influenza A virus (A/New York/763/1993(H3N2))]
 gb|ABG48376.1|  polymerase PB1 [Influenza A virus (A/New York/765/1993(H3N2))]
 gb|ABG67154.1|  polymerase PB1 [Influenza A virus (A/New York/598/1996(H3N2))]
 gb|ABG67220.1|  polymerase PB1 [Influenza A virus (A/New York/722/1994(H3N2))]
 gb|ABG67231.1|  polymerase PB1 [Influenza A virus (A/New York/729/1994(H3N2))]
 gb|ABG67242.1|  polymerase PB1 [Influenza A virus (A/New York/730/1994(H3N2))]
 gb|ABG67253.1|  polymerase PB1 [Influenza A virus (A/New York/734/1994(H3N2))]
 gb|ABG79971.1|  polymerase PB1 [Influenza A virus (A/New York/655/1994(H3N2))]
 gb|ABG80081.1|  polymerase PB1 [Influenza A virus (A/New York/705/1994(H3N2))]
 gb|ABG80125.1|  polymerase PB1 [Influenza A virus (A/New York/714/1994(H3N2))]
 gb|ABG80136.1|  polymerase PB1 [Influenza A virus (A/New York/746/1994(H3N2))]
 gb|ABG80147.1|  polymerase PB1 [Influenza A virus (A/New York/747/1994(H3N2))]
 gb|ABG80158.1|  polymerase PB1 [Influenza A virus (A/New York/748/1994(H3N2))]
 gb|ABG80213.1|  polymerase PB1 [Influenza A virus (A/Waikato/4/2000(H3N2))]
 gb|ABG80367.1|  polymerase PB1 [Influenza A virus (A/New York/770/1993(H3N2))]
 gb|ABG80378.1|  polymerase PB1 [Influenza A virus (A/New York/771/1993(H3N2))]
 gb|ABG80400.1|  polymerase PB1 [Influenza A virus (A/New York/777/1993(H3N2))]
 gb|ABG80422.1|  polymerase PB1 [Influenza A virus (A/New York/779/1993(H3N2))]
 gb|ABG80433.1|  polymerase PB1 [Influenza A virus (A/New York/786/1993(H3N2))]
 gb|ABG88297.1|  polymerase PB1 [Influenza A virus (A/New York/554/1996(H3N2))]
 gb|ABG88418.1|  polymerase PB1 [Influenza A virus (A/New York/718/1994(H3N2))]
 gb|ABG88429.1|  polymerase PB1 [Influenza A virus (A/New York/723/1994(H3N2))]
 gb|ABG88440.1|  polymerase PB1 [Influenza A virus (A/New York/724/1994(H3N2))]
 gb|ABG88451.1|  polymerase PB1 [Influenza A virus (A/New York/725/1994(H3N2))]
 gb|ABG88484.1|  polymerase PB1 [Influenza A virus (A/New York/738/1994(H3N2))]
 gb|ABG88495.1|  polymerase PB1 [Influenza A virus (A/New York/739/1994(H3N2))]
 gb|ABG88517.1|  polymerase PB1 [Influenza A virus (A/New York/741/1994(H3N2))]
 gb|ABG88528.1|  polymerase PB1 [Influenza A virus (A/New York/750/1994(H3N2))]
 gb|ABG88539.1|  polymerase PB1 [Influenza A virus (A/New York/753/1994(H3N2))]
 gb|ABG88594.1|  polymerase PB1 [Influenza A virus (A/Waikato/20/2000(H3N2))]
 gb|ABG88792.1|  polymerase PB1 [Influenza A virus (A/New York/785/1993(H3N2))]
 gb|ABI20922.1|  polymerase PB1 [Influenza A virus (A/New York/731/1994(H3N2))]
 gb|ABI20933.1|  polymerase PB1 [Influenza A virus (A/New York/742/1994(H3N2))]
 gb|ABI20966.1|  polymerase PB1 [Influenza A virus (A/New York/745/1994(H3N2))]
 gb|ABI20999.1|  polymerase PB1 [Influenza A virus (A/Waikato/17/2000(H3N2))]
 gb|ABI21296.1|  polymerase PB1 [Influenza A virus (A/New York/772/1993(H3N2))]
 gb|ABI21318.1|  polymerase PB1 [Influenza A virus (A/New York/774/1993(H3N2))]
 gb|ABI21329.1|  polymerase PB1 [Influenza A virus (A/New York/776/1993(H3N2))]
 gb|ABI21340.1|  polymerase PB1 [Influenza A virus (A/New York/780/1993(H3N2))]
 gb|ABI21351.1|  polymerase PB1 [Influenza A virus (A/New York/784/1993(H3N2))]
 gb|ABI21395.1|  polymerase PB1 [Influenza A virus (A/New York/790/1993(H3N2))]
 gb|ABI21417.1|  polymerase PB1 [Influenza A virus (A/New York/792/1993(H3N2))]
 gb|ABI21428.1|  polymerase PB1 [Influenza A virus (A/New York/794/1993(H3N2))]
 gb|ABI21439.1|  polymerase PB1 [Influenza A virus (A/New York/795/1993(H3N2))]
 gb|ABI21472.1|  polymerase PB1 [Influenza A virus (A/New York/799/1993(H3N2))]
 gb|ABI30397.1|  polymerase PB1 [Influenza A virus (A/New York/717/1994(H3N2))]
 gb|ABI30408.1|  polymerase PB1 [Influenza A virus (A/Wellington/26/2000(H3N2))]
 gb|ABI30873.1|  polymerase PB1 [Influenza A virus (A/New York/796/1993(H3N2))]
 gb|ABI92332.1|  polymerase PB1 [Influenza A virus (A/New York/737/1994(H3N2))]
 gb|ABI92475.1|  polymerase PB1 [Influenza A virus (A/Western Australia/2/2000(H3N2))]
 gb|ABI92486.1|  polymerase PB1 [Influenza A virus (A/Western Australia/3/2000(H3N2))]
 gb|ABI92497.1|  polymerase PB1 [Influenza A virus (A/Western Australia/8/2000(H3N2))]
 gb|ABI92508.1|  polymerase PB1 [Influenza A virus (A/Western Australia/11/2000(H3N2))]
 gb|ABI93080.1|  polymerase PB1 [Influenza A virus (A/New South Wales/25/2000(H3N2))]
 gb|ABI93091.1|  polymerase PB1 [Influenza A virus (A/New South Wales/27/2000(H3N2))]
 gb|ABI93102.1|  polymerase PB1 [Influenza A virus (A/New South Wales/28/2000(H3N2))]
 gb|ABI93113.1|  polymerase PB1 [Influenza A virus (A/New South Wales/29/2000(H3N2))]
 gb|ABI93124.1|  polymerase PB1 [Influenza A virus (A/New South Wales/36/2000(H3N2))]
 gb|ABI95313.1|  polymerase PB1 [Influenza A virus (A/New South Wales/33/2000(H3N2))]
 gb|ABJ09115.1|  polymerase PB1 [Influenza A virus (A/Canterbury/75/2000(H3N2))]
 gb|ABJ09148.1|  polymerase PB1 [Influenza A virus (A/New York/706/1993(H3N2))]
 gb|ABJ09225.1|  polymerase PB1 [Influenza A virus (A/New York/800/1993(H3N2))]
 gb|ABJ09346.1|  polymerase PB1 [Influenza A virus (A/New South Wales/32/2000(H3N2))]
 gb|ABJ09368.1|  polymerase PB1 [Influenza A virus (A/New South Wales/35/2000(H3N2))]
 gb|ABJ16705.1|  polymerase PB1 [Influenza A virus (A/South Australia/59/2000(H3N2))]
 gb|ABJ16749.1|  polymerase PB1 [Influenza A virus (A/South Australia/66/2000(H3N2))]
 gb|ABJ16760.1|  polymerase PB1 [Influenza A virus (A/South Australia/67/2000(H3N2))]
 gb|ABJ16771.1|  polymerase PB1 [Influenza A virus (A/South Australia/68/2000(H3N2))]
 gb|ABJ16793.1|  polymerase PB1 [Influenza A virus (A/South Australia/74/2000(H3N2))]
 gb|ABK40069.1|  polymerase PB1 [Influenza A virus (A/South Australia/52/2000(H3N2))]
 gb|ABK40083.1|  polymerase PB1 [Influenza A virus (A/South Australia/76/2000(H3N2))]
 gb|ABK40620.1|  polymerase PB1 [Influenza A virus (A/Queensland/1/2000(H3N2))]
 gb|ABK40686.1|  polymerase PB1 [Influenza A virus (A/New York/704/1994(H3N2))]
 gb|ABK40708.1|  polymerase PB1 [Influenza A virus (A/Western Australia/1/2000(H3N2))]
 gb|ABK40719.1|  polymerase PB1 [Influenza A virus (A/Western Australia/5/2000(H3N2))]
 gb|ABK40730.1|  polymerase PB1 [Influenza A virus (A/Western Australia/7/2000(H3N2))]
 gb|ABK79989.1|  polymerase PB1 [Influenza A virus (A/South Australia/75/2000(H3N2))]
 gb|ABK80000.1|  polymerase PB1 [Influenza A virus (A/South Australia/77/2000(H3N2))]
 gb|ABK80099.1|  polymerase PB1 [Influenza A virus (A/Queensland/8/2000(H3N2))]
 gb|ABK80110.1|  polymerase PB1 [Influenza A virus (A/Queensland/9/2000(H3N2))]
 gb|ABL67184.1|  polymerase PB1 [Influenza A virus (A/South Australia/2/2000(H3N2))]
 gb|ABO32759.1|  polymerase PB1 [Influenza A virus (A/South Australia/49/2000(H3N2))]
 gb|ABO32770.1|  polymerase PB1 [Influenza A virus (A/South Australia/80/2000(H3N2))]
 gb|ABO33066.1|  polymerase PB1 [Influenza A virus (A/South Australia/15/2000(H3N2))]
 gb|ABQ01341.1|  polymerase PB1 [Influenza A virus (A/South Australia/16/2000(H3N2))]
 gb|ABQ01352.1|  polymerase PB1 [Influenza A virus (A/South Australia/47/2000(H3N2))]
 gb|ABQ44391.1|  polymerase PB1 [Influenza A virus (A/South Australia/73/2000(H3N2))]
 gb|ABR28523.1|  polymerase PB1 [Influenza A virus (A/Western Australia/4/2000(H3N2))]
 gb|ABR28798.1|  polymerase PB1 [Influenza A virus (A/Auckland/588/2000(H3N2))]
 gb|ABS49973.1|  polymerase PB1 [Influenza A virus (A/Auckland/589/2000(H3N2))]
 gb|ABS50039.1|  polymerase PB1 [Influenza A virus (A/Auckland/601/2000(H3N2))]
 gb|ACF54562.1|  polymerase PB1 [Influenza A virus (A/Panama/2007/1999(H3N2))]
 gb|ACJ67530.1|  polymerase PB1 [Influenza A virus (A/ferret/Maryland/P10-UMD/2008(H9N2))]
 gb|ACL12137.1|  polymerase PB1 [Influenza A virus (A/Shangdong/9/1993(H3N2))]
 gb|ACO95267.1|  polymerase PB1 [Influenza A virus (A/Sydney/5/1997(H3N2))]
Length=757

 Score = 1571 bits (4068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACD65217.1|  polymerase PB1 [Influenza A virus (A/swine/Ohio/24366/07(H1N1))]
 gb|ACH69550.1|  polymerase PB1 [Influenza A virus (A/swine/OH/511445/2007(H1N1))]
Length=757

 Score = 1571 bits (4067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABP49434.1|  polymerase PB1 [Influenza A virus (A/South Australia/81/2000(H3N2))]
Length=757

 Score = 1571 bits (4067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMA+QLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMAIQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80389.1|  polymerase PB1 [Influenza A virus (A/New York/775/1993(H3N2))]
Length=757

 Score = 1571 bits (4067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRN+HIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNIHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80169.1|  polymerase PB1 [Influenza A virus (A/New York/749/1994(H3N2))]
Length=757

 Score = 1571 bits (4067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSG+PVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGIPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD94874.1|  polymerase PB1 [Influenza A virus (A/New York/582/1996(H3N2))]
 gb|ABG37139.1|  polymerase PB1 [Influenza A virus (A/New York/571/1996(H3N2))]
Length=757

 Score = 1571 bits (4067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSC+ETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCIETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAL87924.1|AF455726_1  polymerase subunit [Influenza A virus (A/Swine/Minnesota/55551/00 
(H1N2))]
Length=757

 Score = 1571 bits (4067),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS+KGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSQKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEE+E
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEME  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAM+TYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMVTYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADM IGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMKIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABS50017.1|  polymerase PB1 [Influenza A virus (A/Auckland/599/2000(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GL+VSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLMVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABJ09357.1|  polymerase PB1 [Influenza A virus (A/New South Wales/34/2000(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLG+KKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGKKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG88385.1|  polymerase PB1 [Influenza A virus (A/New York/686/1995(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCH+GDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHKGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80103.1|  polymerase PB1 [Influenza A virus (A/New York/710/1994(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80004.1|  polymerase PB1 [Influenza A virus (A/New York/664/1995(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPSHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABF18011.1|  polymerase subunit PB1 [Influenza A virus (A/swine/Manitoba/12707/2005(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK LWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKSLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG48288.1|  polymerase PB1 [Influenza A virus (A/New York/756/1993(H3N2))]
 gb|ABG48365.1|  polymerase PB1 [Influenza A virus (A/New York/764/1993(H3N2))]
 gb|ABG88759.1|  polymerase PB1 [Influenza A virus (A/New York/781/1993(H3N2))]
 gb|ABI21274.1|  polymerase PB1 [Influenza A virus (A/New York/768/1993(H3N2))]
 gb|ABI21483.1|  polymerase PB1 [Influenza A virus (A/New York/801/1993(H3N2))]
 gb|ABI21494.1|  polymerase PB1 [Influenza A virus (A/New York/802/1993(H3N2))]
 gb|ABI21505.1|  polymerase PB1 [Influenza A virus (A/New York/803/1993(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKTGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG47991.1|  polymerase PB1 [Influenza A virus (A/New York/720/1994(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+S+NNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESINNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG47892.1|  polymerase PB1 [Influenza A virus (A/New York/685/1995(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESAD+SIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADISIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG26887.1|  polymerase PB1 [Influenza A virus (A/New York/697/1995(H3N2))]
 gb|ABG37348.1|  polymerase PB1 [Influenza A virus (A/New York/693/1995(H3N2))]
 gb|ABG67198.1|  polymerase PB1 [Influenza A virus (A/New York/677/1995(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDV+ESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVIESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABE14510.1|  polymerase PB1 [Influenza A virus (A/New York/634/1995(H3N2))]
 gb|ABG67675.1|  polymerase PB1 [Influenza A virus (A/New York/639/1995(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKSGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY64350.1|  polymerase PB1 [Influenza A virus (A/New York/264/1999(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPG+FENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGLFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAL87926.1|AF455728_1  polymerase subunit [Influenza A virus (A/Swine/Indiana/P12439/00 
(H1N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYS+KGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSKKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFE TSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFELTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSI+NTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSIINTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD15677.1|  polymerase PB1 [Influenza A virus (A/Canterbury/101/2000(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLL+DGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLLDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB80522.1|  polymerase PB1 [Influenza A virus (A/New York/524/1997(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPE+NEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEBNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB77861.1|  polymerase PB1 [Influenza A virus (A/New York/503/1997(H3N2))]
 gb|ABB77872.1|  polymerase PB1 [Influenza A virus (A/New York/508/1997(H3N2))]
 gb|ABB79724.1|  polymerase PB1 [Influenza A virus (A/New York/515/1997(H3N2))]
 15 more sequence titles
 gb|ABB80089.1|  polymerase PB1 [Influenza A virus (A/New York/512/1998(H3N2))]
 gb|ABB80167.1|  polymerase PB1 [Influenza A virus (A/New York/509/1997(H3N2))]
 gb|ABB80204.1|  polymerase PB1 [Influenza A virus (A/New York/519/1998(H3N2))]
 gb|ABB80248.1|  polymerase PB1 [Influenza A virus (A/New York/534/1998(H3N2))]
 gb|ABB80511.1|  polymerase PB1 [Influenza A virus (A/New York/523/1998(H3N2))]
 gb|ABB80543.1|  polymerase PB1 [Influenza A virus (A/New York/531/1998(H3N2))]
 gb|ABB80690.1|  polymerase PB1 [Influenza A virus (A/New York/542/1998(H3N2))]
 gb|ABB80701.1|  polymerase PB1 [Influenza A virus (A/New York/543/1998(H3N2))]
 gb|ABC50175.1|  polymerase PB1 [Influenza A virus (A/New York/510/1998(H3N2))]
 gb|ABC50186.1|  polymerase PB1 [Influenza A virus (A/New York/511/1997(H3N2))]
 gb|ABC67584.1|  polymerase PB1 [Influenza A virus (A/New York/526/1997(H3N2))]
 gb|ABD15545.1|  polymerase PB1 [Influenza A virus (A/New York/544/1998(H3N2))]
 gb|ABD15556.1|  polymerase PB1 [Influenza A virus (A/New York/549/1998(H3N2))]
 gb|ABD15578.1|  polymerase PB1 [Influenza A virus (A/New York/530/1998(H3N2))]
 gb|ABD15600.1|  polymerase PB1 [Influenza A virus (A/New York/514/1998(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY98327.1|  polymerase PB1 [Influenza A virus (A/New York/323/1999(H3N2))]
Length=757

 Score = 1570 bits (4066),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEV+QQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVIQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACH58919.1|  polymerase PB1 [Influenza A virus (A/swine/Minnesota/7209/2007(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRMNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK+LWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKRLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACE78120.1|  polymerase PB1 [Influenza A virus (A/swine/Korea/CY07/2007(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRR+RDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRIRDNMTKKMVTQRTIGKKKQRVNKRNYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAE+LASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEVLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALI+NAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIINAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80092.1|  polymerase PB1 [Influenza A virus (A/New York/707/1994(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQT+CVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTECVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG80026.1|  polymerase PB1 [Influenza A virus (A/New York/667/1995(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEE RRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEEFRRQK  757


>gb|ABG26876.1|  polymerase PB1 [Influenza A virus (A/New York/696/1994(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVE LARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVEILARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABE14060.1|  polymerase PB1 [Influenza A virus (A/New York/625/1996(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKAPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABE13603.1|  polymerase PB1 [Influenza A virus (A/New York/606/1995(H3N2))]
 gb|ABE14038.1|  polymerase PB1 [Influenza A virus (A/New York/619/1996(H3N2))]
 gb|ABE14887.1|  polymerase PB1 [Influenza A virus (A/New York/637/1996(H3N2))]
 gb|ABE15620.1|  polymerase PB1 [Influenza A virus (A/New York/648/1995(H3N2))]
 gb|ABG47859.1|  polymerase PB1 [Influenza A virus (A/New York/647/1995(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTR+D
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRMD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD94885.1|  polymerase PB1 [Influenza A virus (A/New York/591/1996(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRI+KEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIEKEEFSEIMKICSTIEELRRQK  757


>gb|ABD77837.1|  polymerase PB1 [Influenza A virus (A/New York/558/1997(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKL+GINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLMGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAX11643.1|  polymerase PB1 [Influenza A virus (A/New York/110/2002(H3N2))]
 gb|AAX57672.1|  polymerase PB1 [Influenza A virus (A/New York/109/2002(H3N2))]
 gb|ABA42343.1|  polymerase PB1 [Influenza A virus (A/New York/403/2002(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYR CKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRICKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAO15324.1|AF225520_1  polymerase basic 1 [Influenza A virus (A/sw/Shizuoka/119/97(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR++FESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIEFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB80193.1|  polymerase PB1 [Influenza A virus (A/New York/518/1998(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSC+ETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCIETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNM+NNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMVNNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB80100.1|  polymerase PB1 [Influenza A virus (A/New York/516/1997(H3N2))]
Length=757

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            +RNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  VRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>emb|CAC84754.1|  polymerase subunit 1 [Influenza A virus (swine/Finistere/127/99(H3N2))]
Length=756

 Score = 1570 bits (4065),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/756 (98%), Positives = 754/756 (99%), Gaps = 0/756 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQ  756
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQ
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQ  756


>gb|ABY81661.2|  polymerase PB1 [Influenza A virus (A/swine/Korea/JNS06/2004(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKG+WTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+ KRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVTKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYIN+TGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIG TVIKNNMINNDLG
Sbjct  481  KSYINRTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGATVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABJ09247.1|  polymerase PB1 [Influenza A virus (A/Western Australia/12/2000(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABI21406.1|  polymerase PB1 [Influenza A virus (A/New York/791/1993(H3N2))]
 gb|ABI93069.1|  polymerase PB1 [Influenza A virus (A/New South Wales/20/1999(H3N2))]
 gb|ABJ09324.1|  polymerase PB1 [Influenza A virus (A/New South Wales/21/1999(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFE FFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFENFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG47958.1|  polymerase PB1 [Influenza A virus (A/New York/715/1994(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPN YN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNSYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG48332.1|  polymerase PB1 [Influenza A virus (A/New York/761/1993(H3N2))]
 gb|ABG80356.1|  polymerase PB1 [Influenza A virus (A/New York/767/1993(H3N2))]
 gb|ABI21373.1|  polymerase PB1 [Influenza A virus (A/New York/788/1993(H3N2))]
 gb|ABI21384.1|  polymerase PB1 [Influenza A virus (A/New York/789/1993(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFE+FFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFERFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD79175.1|  polymerase PB1 [Influenza A virus (A/New York/579/1997(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPDHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRG+LEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGVLEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD79131.1|  polymerase PB1 [Influenza A virus (A/New York/560/1997(H3N2))]
 gb|ABD79142.1|  polymerase PB1 [Influenza A virus (A/New York/564/1997(H3N2))]
 gb|ABD79153.1|  polymerase PB1 [Influenza A virus (A/New York/565/1996(H3N2))]
 8 more sequence titles
 gb|ABD79164.1|  polymerase PB1 [Influenza A virus (A/New York/575/1996(H3N2))]
 gb|ABD79186.1|  polymerase PB1 [Influenza A virus (A/New York/583/1997(H3N2))]
 gb|ABD79197.1|  polymerase PB1 [Influenza A virus (A/New York/566/1997(H3N2))]
 gb|ABD79208.1|  polymerase PB1 [Influenza A virus (A/New York/574/1996(H3N2))]
 gb|ABD79230.1|  polymerase PB1 [Influenza A virus (A/New York/581/1997(H3N2))]
 gb|ABD79241.1|  polymerase PB1 [Influenza A virus (A/New York/587/1996(H3N2))]
 gb|ABD94907.1|  polymerase PB1 [Influenza A virus (A/New York/594/1996(H3N2))]
 gb|ABE13126.1|  polymerase PB1 [Influenza A virus (A/New York/572/1996(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPDHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY64250.1|  polymerase PB1 [Influenza A virus (A/New York/253/1999(H3N2))]
 gb|AAY98115.1|  polymerase PB1 [Influenza A virus (A/New York/280/1999(H3N2))]
 gb|AAY98235.1|  polymerase PB1 [Influenza A virus (A/New York/320/1999(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEEL+RQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELKRQK  757


>gb|AAX47533.1|  polymerase PB1 [Influenza A virus (A/New York/96/2002(H3N2))]
Length=758

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYR CKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRICKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD15644.1|  polymerase PB1 [Influenza A virus (A/New York/550/1998(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKL+RRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLRRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABC59715.1|  polymerase PB1 [Influenza A virus (A/turkey/Ohio/313053/04(H3N2))]
 gb|ACD88667.1|  polymerase PB1 [Influenza A virus (A/turkey/OH/313053/2004(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK+LWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKRLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABC02296.1|  polymerase PB1 [Influenza A virus (A/New York/527/1998(H3N2))]
 gb|ABG88737.1|  polymerase PB1 [Influenza A virus (A/New York/754/1993(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT++QPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKSQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB96539.1|  polymerase PB1 [Influenza A virus (A/New York/535/1998(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIK+EEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKREEFSEIMKICSTIEELRRQK  757


>gb|AAZ43413.1|  polymerase PB1 [Influenza A virus (A/Memphis/59/99(H3N2))]
 gb|ABU80328.1|  polymerase PB1 [Influenza A virus (A/Auckland/598/2000(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEE+E
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEME  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY98404.1|  polymerase PB1 [Influenza A virus (A/New York/338/1999(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIK+NMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKSNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAX76751.1|  polymerase PB1 [Influenza A virus (A/New York/194/2003(H3N2))]
 gb|AAY47083.1|  polymerase PB1 [Influenza A virus (A/New York/195/2003(H3N2))]
 gb|ABI92739.1|  polymerase PB1 [Influenza A virus (A/Western Australia/45/2003(H3N2))]
Length=757

 Score = 1570 bits (4064),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 743/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYR CKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRICKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACO36361.1|  polymerase PB1 [Influenza A virus (A/Siena/3/1995(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVM+SM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMKSMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACK99484.1|  polymerase PB1 [Influenza A virus (A/Siena/1/1997(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNH+GIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHDGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABS50006.1|  polymerase PB1 [Influenza A virus (A/Auckland/596/2000(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEK+RPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKVRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIE+LRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEKLRRQK  757


>gb|ABJ09269.1|  polymerase PB1 [Influenza A virus (A/New South Wales/5/1999(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIE+LRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEDLRRQK  757


>gb|ABI20944.1|  polymerase PB1 [Influenza A virus (A/New York/743/1994(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KE+IE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEKIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG88781.1|  polymerase PB1 [Influenza A virus (A/New York/783/1993(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVI+NNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIRNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFE+FFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFERFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG88748.1|  polymerase PB1 [Influenza A virus (A/New York/755/1993(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMT KMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTNKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRN+HIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNIHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABG26865.1|  polymerase PB1 [Influenza A virus (A/New York/695/1995(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKTGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAK+MEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKNMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARID R+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDVRIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABF21245.1|  polymerase PB1 [Influenza A virus (A/Panama/2007/1999(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRG+LCNPLNPFVSHKE++SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGKLCNPLNPFVSHKELESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD94940.1|  polymerase PB1 [Influenza A virus (A/New York/600/1996(H3N2))]
 gb|ABF82703.1|  polymerase PB1 [Influenza A virus (A/New York/599/1996(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAP+HEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPDHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD94830.1|  polymerase PB1 [Influenza A virus (A/New York/536/1998(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASI+LKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASINLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD77694.1|  polymerase PB1 [Influenza A virus (A/New York/569/1997(H3N2))]
 gb|ABD94929.1|  polymerase PB1 [Influenza A virus (A/New York/596/1996(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMES++KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESIDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD77617.1|  polymerase PB1 [Influenza A virus (A/Canterbury/10/2001(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 754/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEW RNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWLRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY46444.1|  polymerase PB1 [Influenza A virus (A/New York/250/1998(H3N2))]
 gb|AAY64410.1|  polymerase PB1 [Influenza A virus (A/New York/287/1998(H3N2))]
 gb|AAZ38481.1|  polymerase PB1 [Influenza A virus (A/New York/324/1999(H3N2))]
 gb|ABB02955.1|  polymerase PB1 [Influenza A virus (A/New York/448/1998(H3N2))]
 gb|ABI20955.1|  polymerase PB1 [Influenza A virus (A/New York/744/1994(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLET+EVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETIEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAX57822.1|  polymerase PB1 [Influenza A virus (A/New York/167/1999(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEE+E
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEME  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQS+ GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSRAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY18174.1|  polymerase PB1 [Influenza A virus (A/New York/138/1999(H3N2))]
 gb|AAY28283.1|  polymerase PB1 [Influenza A virus (A/New York/137/1999(H3N2))]
 gb|AAY44763.1|  polymerase PB1 [Influenza A virus (A/New York/145/1999(H3N2))]
 gb|ABB05202.1|  polymerase PB1 [Influenza A virus (A/New York/423/1999(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVV+PAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVVPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAM78509.1|AF483601_1  polymerase complex subunit PB1 [Influenza A virus (A/Paris/908/97(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+K+EIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKDEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAL87922.1|AF455724_1  polymerase subunit [Influenza A virus (A/Swine/North Carolina/98225/01(H1N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKG+WTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+ K+GYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVTKKGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVV PAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVTPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD61334.1|  polymerase PB1 [Influenza A virus (A/Canterbury/96/2000(H3N2))]
 gb|ABE12114.1|  polymerase PB1 [Influenza A virus (A/Canterbury/92/2000(H3N2))]
 gb|ABG79949.1|  polymerase PB1 [Influenza A virus (A/Canterbury/97/2000(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYT+DTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTIDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABD15655.1|  polymerase PB1 [Influenza A virus (A/Canterbury/90/2000(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQ+TRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQKTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABC40616.1|  polymerase PB1 [Influenza A virus (A/New York/460/1999(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKK+TKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKHTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB80756.1|  polymerase PB1 [Influenza A virus (A/New York/525/1998(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKI+KIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIKKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ABB80721.1|  polymerase PB1 [Influenza A virus (A/New York/547/1997(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 741/757 (97%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMA+LGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMAKLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLF+KDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFLKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|AAY98125.1|  polymerase PB1 [Influenza A virus (A/New York/282/1999(H3N2))]
Length=757

 Score = 1569 bits (4063),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNL+N
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLHN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACH58913.1|  polymerase PB1 [Influenza A virus (A/swine/Minnesota/578/2007(H3N2))]
Length=757

 Score = 1569 bits (4062),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETME+VQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEIVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELK LWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKSLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVN+AVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNSAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACI26579.1|  polymerase PB1 [Influenza A virus (A/Siena/10/1990(H3N2))]
Length=757

 Score = 1569 bits (4062),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 755/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKRGYLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRGYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYIT+NQPEWFRNILS+APIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            RMK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  RMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYTKT YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DY+GRLCNPLNPFVSHKEI+SVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757


>gb|ACE78116.1|  polymerase PB1 [Influenza A virus (A/swine/Korea/CY04/2007(H3N2))]
 gb|ACE78118.1|  polymerase PB1 [Influenza A virus (A/swine/Korea/CY05/2007(H3N2))]
Length=757

 Score = 1569 bits (4062),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 742/757 (98%), Positives = 753/757 (99%), Gaps = 0/757 (0%)

Query  1    MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60
            MDVNPTLLFLK+PAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE
Sbjct  1    MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTE  60

Query  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120
            TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD
Sbjct  61   TGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVD  120

Query  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIE  180
            KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESM+KEEIE
Sbjct  121  KLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIE  180

Query  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRA  240
            ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQR+NKR YLIRALTLNTMTKDAERGKLKRRA
Sbjct  181  ITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRA  240

Query  241  IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISF  300
            IATPGMQIRGFVYFVE LARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTE+SF
Sbjct  241  IATPGMQIRGFVYFVEILARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSF  300

Query  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360
            TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK
Sbjct  301  TITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESK  360

Query  361  RMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420
            +MK+RTQIPAEMLASIDLKYFNEST+KKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG
Sbjct  361  KMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLG  420

Query  421  VSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480
            VSILNLGQKKYT+T YWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK
Sbjct  421  VSILNLGQKKYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKK  480

Query  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLG  540
            KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSG+NESADMSIGVTVIKNNMINNDLG
Sbjct  481  KSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLG  540

Query  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYN  600
            PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSK GLLVSDGGPNLYN
Sbjct  541  PATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKAGLLVSDGGPNLYN  600

Query  601  IRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660
            IRNLHIPEVCLKWELMD+DYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV
Sbjct  601  IRNLHIPEVCLKWELMDEDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAV  660

Query  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720
            ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS
Sbjct  661  ATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS  720

Query  721  RARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK  757
            RARIDAR+DFESGRIKKEEFSEIMKICSTIEELRRQK
Sbjct  721  RARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK  757
Proteopedia Page Contributors and Editors (what is this?)

Michael Strong
Retrieved from "http://52.214.119.220/wiki/index.php/User:Michael_Strong/H1N1/PB1"
User:Michael Strong/H1N1/PB1

From Proteopedia

Revision as of 22:02, 7 May 2009

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox
