User:Tilman Schirmer/Sandbox 201

From Proteopedia

proteopedia linkproteopedia link

Revision as of 18:56, 20 June 2009 (edit) Tilman Schirmer (Talk | contribs) (→Protomer) ← Previous diff		Revision as of 18:59, 20 June 2009 (edit) (undo) Tilman Schirmer (Talk | contribs) (→Protomer) Next diff →
Line 22:		Line 22:
	<scene name='User:Tilman_Schirmer/Sandbox_201/Protomer/7'>Rec</scene>		<scene name='User:Tilman_Schirmer/Sandbox_201/Protomer/7'>Rec</scene>
-	<scene name='User:Tilman_Schirmer/Sandbox_201/Protomer_rec_prime/1'>Rec'</scene>	+	<scene name='User:Tilman_Schirmer/Sandbox_201/Protomer_rec_prime/2'>Rec'</scene>
	<scene name='User:Tilman_Schirmer/Sandbox_201/Protomer_ggdef/1'>GGDEF</scene>		<scene name='User:Tilman_Schirmer/Sandbox_201/Protomer_ggdef/1'>GGDEF</scene>

---

Revision as of 18:59, 20 June 2009

back

PleD

Contents 1 Intro 2 Domain structure 3 Protomer 4 Substrate binding site 5 Allosteric product binding site 5.1 C-di-GMP 5.2 Primary inhibition site (Ip) 5.3 Secondary inhibition site (Is) 5.4 Primary and secondary inhibition sites 6 Two conformations 7 Non-activated conformation 8 Activated conformation

Intro

Domain structure

Protomer

spinqualitylabelsall models Diguanylate cyclase PleD (1w25) Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

Substrate binding site

spinqualitylabelsall models 2v0n Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

Allosteric product binding site

spinqualitylabelsall models Allosteric product binding site Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

C-di-GMP

---

Primary inhibition site (Ip)

---

Secondary inhibition site (Is)

---

Primary and secondary inhibition sites

Two conformations

spinqualitylabelsall models non-activated (1w25) Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

spinqualitylabelsall models activated (BeF3- modified; 2v0n) Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

Non-activated conformation

1w25

spinqualitylabelsall models 1w25 Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

: , ,

Activated conformation

2v0n

spinqualitylabelsall models 2v0n Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image