Sandbox 173

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Rhodopsin, a dimeric protein, is a highly characterized G protein-coupled receptor found in the neurons of the retina and in rod photoreceptor cells. It is part of the Class A (Family 1) of G protein-coupled receptors, a superfamily of membrane receptors with seven transmembrane helices[1]. G protein-coupled receptors mediate responses to visual, olfactory, hormonal, and neurotransmitter signals among others[2].

PDB ID 1u19

Drag the structure with the mouse to rotate
1u19, resolution 2.20Å ()
Ligands: , , , , , , , ,
Non-Standard Residues:
Related: 1f88, 1hzx, 1l9h
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Contents

Structure

Characteristic G Protein-Coupled Receptor Architecture

Rhodopsin consists of seven mostly α-helical transmembrane domains (H1-H7)linked sequentially by extracellular and cytoplasmic loops (E1-E3 and C1-C3 respectively), with the extracellular amino-terminal tail and the cytoplasmic carboxyl-terminal tail[3]. Four of the helices are tilted and three of the helices are approximately perpendicular to the membrane plane[4].


Function

Light-Induced Visual Signal Transduction

Light absorption and G protein activation

Opsin

References

  • Okada T, Sugihara M, Bondar AN, Elstner M, Entel P, Buss V. The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure. J Mol Biol. 2004 Sep 10;342(2):571-83. PMID:15327956 doi:10.1016/j.jmb.2004.07.044
  1. Article 6
  2. Article 1
  3. Article 12
  4. Article 4
Please do NOT make changes to this Sandbox until after April 23, 2010. Sandboxes 151-200 are reserved until then for use by the Chemistry 307 class at UNBC taught by Prof. Andrea Gorrell.
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