This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1tfr

From Proteopedia

Revision as of 12:17, 20 March 2008 by OCA (Talk | contribs)
Jump to: navigation, search


PDB ID 1tfr

Drag the structure with the mouse to rotate
, resolution 2.06Å
Ligands:
Activity: Ribonuclease H, with EC number 3.1.26.4
Coordinates: save as pdb, mmCIF, xml



RNASE H FROM BACTERIOPHAGE T4


Overview

Bacteriophage T4 RNase H is a 5' to 3' exonuclease that removes RNA primers from the lagging strand of the DNA replication fork and is a member of the RAD2 family of eukaryotic and prokaryotic replication and repair nucleases. The crystal structure of the full-length native form of T4 RNase H has been solved at 2.06 angstroms resolution in the presence of Mg2+ but in the absence of nucleic acids. The most conserved residues are clustered together in a large cleft with two Mg2+ in the proposed active site. This structure suggests the way in which the widely separated conserved regions in the larger nucleotide excision repair proteins, such as human XPG, could assemble into a structure like that of the smaller replication nucleases.

About this Structure

1TFR is a Single protein structure of sequence from Bacteriophage t4. Full crystallographic information is available from OCA.

Reference

Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins., Mueser TC, Nossal NG, Hyde CC, Cell. 1996 Jun 28;85(7):1101-12. PMID:8674116

Page seeded by OCA on Thu Mar 20 14:17:48 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools