This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hyi

From Proteopedia

Revision as of 00:37, 31 March 2008 by OCA (Talk | contribs)
Jump to: navigation, search


PDB ID 2hyi

Drag the structure with the mouse to rotate
, resolution 2.3Å
Ligands: , ,
Gene: MAGOH (Homo sapiens), RBM8A, RBM8 (Homo sapiens), DDX48, EIF4A3, KIAA0111 (Homo sapiens), CASC3, MLN51 (Homo sapiens)
Related: 2hxy, 1p27, 2db3


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA


Overview

In higher eukaryotes, a multiprotein exon junction complex is deposited on spliced messenger RNAs. The complex is organized around a stable core, which serves as a binding platform for numerous factors that influence messenger RNA function. Here, we present the crystal structure of a tetrameric exon junction core complex containing the DEAD-box adenosine triphosphatase (ATPase) eukaryotic initiation factor 4AIII (eIF4AIII) bound to an ATP analog, MAGOH, Y14, a fragment of MLN51, and a polyuracil mRNA mimic. eIF4AIII interacts with the phosphate-ribose backbone of six consecutive nucleotides and prevents part of the bound RNA from being double stranded. The MAGOH and Y14 subunits lock eIF4AIII in a prehydrolysis state, and activation of the ATPase probably requires only modest conformational changes in eIF4AIII motif I.

About this Structure

2HYI is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Structure of the exon junction core complex with a trapped DEAD-box ATPase bound to RNA., Andersen CB, Ballut L, Johansen JS, Chamieh H, Nielsen KH, Oliveira CL, Pedersen JS, Seraphin B, Le Hir H, Andersen GR, Science. 2006 Sep 29;313(5795):1968-72. Epub 2006 Aug 24. PMID:16931718

Page seeded by OCA on Mon Mar 31 03:37:13 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools