2b3e
From Proteopedia
Crystal structure of DB819-D(CGCGAATTCGCG)2 complex.
Overview
The crystal structure of the DNA minor groove biphenyl benzimidazole diamidine ligand DB819 has been determined, bound to the DNA sequence d(CGCGAATTCGCG)(2), at a resolution of 1.36 Angstrom. Conditions for reliable in silico docking that reproduce the observed position of the ligand in the minor groove have been determined.
About this Structure
Full crystallographic information is available from OCA.
Reference
Targeting the DNA minor groove with fused ring dicationic compounds: comparison of in silico screening and a high-resolution crystal structure., Campbell NH, Evans DA, Lee MP, Parkinson GN, Neidle S, Bioorg Med Chem Lett. 2006 Jan 1;16(1):15-9. Epub 2005 Nov 2. PMID:16263285 Page seeded by OCA on Sat May 3 19:48:12 2008
Categories: Campbell, N H. | Evans, D A. | Lee, M P. | Neidle, S. | Parkinson, G N. | A2t2 | Crystal structure of b-dna | Db819 | Dickerson and drew dodecamer | Dna | Dna hydration. | Dna minor | Dna minor groove-ligand complex | Dna-drug complex | Double helix | Groove binder | Hydrated magnesium | Magnesium-water complex | Minor groove | Nucleic acid
