6b5v
From Proteopedia
Structure of TRPV5 in complex with econazole
Structural highlights
Function[TRPV5_RABIT] Constitutively active calcium selective cation channel thought to be involved in Ca(2+) reabsorption in kidney and intestine (PubMed:12574114). Required for normal Ca(2+) reabsorption in the kidney distal convoluted tubules (By similarity). The channel is activated by low internal calcium level and the current exhibits an inward rectification (By similarity). A Ca(2+)-dependent feedback regulation includes fast channel inactivation and slow current decay (By similarity). Heteromeric assembly with TRPV6 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating (PubMed:12574114).[UniProtKB:P69744][UniProtKB:Q9NQA5][1] [2] [3] Publication Abstract from PubMedThe transient receptor potential vanilloid 5 (TRPV5) channel is a member of the transient receptor potential (TRP) channel family, which is highly selective for Ca(2+), that is present primarily at the apical membrane of distal tubule epithelial cells in the kidney and plays a key role in Ca(2+) reabsorption. Here we present the structure of the full-length rabbit TRPV5 channel as determined using cryo-EM in complex with its inhibitor econazole. This structure reveals that econazole resides in a hydrophobic pocket analogous to that occupied by phosphatidylinositides and vanilloids in TRPV1, thus suggesting conserved mechanisms for ligand recognition and lipid binding among TRPV channels. The econazole-bound TRPV5 structure adopts a closed conformation with a distinct lower gate that occludes Ca(2+) permeation through the channel. Structural comparisons between TRPV5 and other TRPV channels, complemented with molecular dynamics (MD) simulations of the econazole-bound TRPV5 structure, allowed us to gain mechanistic insight into TRPV5 channel inhibition by small molecules. Structural basis of TRPV5 channel inhibition by econazole revealed by cryo-EM.,Hughes TET, Lodowski DT, Huynh KW, Yazici A, Del Rosario J, Kapoor A, Basak S, Samanta A, Han X, Chakrapani S, Zhou ZH, Filizola M, Rohacs T, Han S, Moiseenkova-Bell VY Nat Struct Mol Biol. 2018 Jan;25(1):53-60. doi: 10.1038/s41594-017-0009-1. Epub, 2018 Jan 1. PMID:29323279[4] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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Categories: European rabbit | Large Structures | Basak, S | Chakrapani, S | Filizola, M | Han, S | Hughes, T E.T | Huynh, K W | Kapoor, A | Lodowski, D T | Moiseenkova-Bell, V Y | Rohacs, T | Rosario, J del | Samanta, A | Yazici, A | Zhou, Z H | Cryo-em | Econazole | Membrane protein | Transient receptor potential channel | Trpv5
