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| This Sandbox is Reserved from August 30, 2022 through May 31, 2023 for use in the course Biochemistry I taught by Kimberly Lane at the Radford University, Radford, VA, USA. This reservation includes Sandbox Reserved 1730 through Sandbox Reserved 1749.
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To get started:
- Click the edit this page tab at the top. Click on Show preview and then Save the page after each step, then edit it again.
- show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
- Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.
More help: Help:Editing
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Structure
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You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue.
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This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
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References
1. D. J. Roberts, S. Miyamoto. Hexokinase II integrates energy metabolism and cellular protection: Akting on mitochondria and TORCing to autophagy. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4291497/ (Accessed 10/21/2022).
2. Anne M. Mulichuk, John E. Wilson, Kaillathe Padmanabhan, Michael Garavito. The structure of mammalian hexokinase-1. https://www.nature.com/articles/nsb0798_555. (Accessed 10/21/2022).
3. Valerie P. Tan, Shigeki Miyamoto. HK2/hexokinase-II integrates glycolysis and autophagy to confer cellular protection. https://pubmed.ncbi.nlm.nih.gov/26075878/. (Accessed 10/21/2022).
4. M. Magnani, M. Bianchi, A. Casabianca, V. Stocchi, A. Daniele, F. Altruda, M. Ferrone, L. Silengo. A recombinant human 'mini'-hexokinase is catalytically active and regulated by hexose 6-phosphates. https://pubmed.ncbi.nlm.nih.gov/1637300/. (Accessed 10/21/2022).
5. A. E. Aleshin, C. Zeng, G. P. Bourenkov, H. D. Bartunik, H. J. Fromm, R. B. Honzatko. The mechanism of regulation of hexokinase: new insights from the crystal structure of recombinant human brain hexokinase complexed with glucose and glucose-6-phosphate. https://pubmed.ncbi.nlm.nih.gov/9493266/. (Accessed 10/21/2022).
6. Richard Southworth, Katherine A. B. Davey, Alice Warley, Pamela B. Garlick. A reevaluation of the roles of hexokinase I and II in the heart. https://journals.physiology.org/doi/full/10.1152/ajpheart.00664.2006. (Accessed 10/21/2022)
7. Èric Claeyssen, Jean Rivoal. Isozymes of plant hexokinase: Occurrence, properties and functions. https://www.sciencedirect.com/science/article/abs/pii/S0031942206007606. (Accessed 10/21/2022)
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
