Stancu Harmon Tiedman Sandbox 12

From Proteopedia

Revision as of 14:46, 19 February 2010 by Ann Taylor (Talk | contribs)
(diff) ←Older revision | Current revision (diff) | Newer revision→ (diff)
Jump to: navigation, search

The Mechanism of Trypsin

The structure of trypsin is characterized by an active site with a catalytic triad His- Asp- Ser (residue numbers 57, 102 and 195). The His 57 acts as a proton acceptor for the Ser 195, activating the nucleophilic attack at the carbonyl group on incident proteins. Asp 102 further stabilizes the histidine residue through hydrogen bonding. The specificity of the active site pocket is characterized by the presence of an anionic Asp residue, 189, used to create ionic interactions to accommodate bulky side chains like Arg and Lys from the other protein



PDB ID 2agi

Drag the structure with the mouse to rotate
3cin, resolution 1.70Å ()
Ligands: , ,
Gene: TM1419, TM_1419 (Thermotoga maritima MSB8)
Activity: Inositol-3-phosphate synthase, with EC number 5.5.1.4
Resources: FirstGlance, OCA, RCSB, PDBsum, TOPSAN
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

Ann Taylor

Personal tools