Testing Jmol 12.2.16

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Findings while testing Jmol 12.2.XX on Proteopedia:

?JMOLJAR=http://proteopedia.org/jmol12.2.16/JmolAppletSigned0.jar

Note that the About/Version will return 12.2.18_dev

  • Inserting quoted text in an echo makes the whole scene to fail. Statements like this one is a ticket to failure

echo "Dealkylation ("aging")"; since the Jmol parser is unable to properly pair the nested quotes.

Alex:
1) It is impossible to change the color of molecules, residues, atoms etc - halos disappeared and colors are not changed. In contrast to that, it is possible to change representations - everything OK with the halos.

2) When the scene was saved the orientation of the protein did not change – it was as original position of the protein.

Yossi: http://www.proteopedia.org/wiki/index.php/Test_3639 . Used Safari 5.04.4
1) same as Alex's 1) above. BUT I could change the background color.

2) again, same as Alex's 2) above. I zoomed all the way in. but when saved and viewed it was zoomed out.

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