2a6r

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2a6r, resolution 2.05Å

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Crystal structure of YoeB under PEG condition

Overview

The eubacterial chromosome encodes various addiction modules that control, global levels of translation through RNA degradation. Crystal structures, of the Escherichia coli YefM2 (antitoxin)-YoeB (toxin) complex and the, free YoeB toxin have been determined. The structure of the heterotrimeric, complex reveals an asymmetric disorder-to-order recognition strategy, in, which one C terminus of the YefM homodimer exclusively interacts with an, atypical microbial ribonuclease (RNase) fold of YoeB. Comparison with the, YefM-free YoeB structure indicates a conformational rearrangement of the, RNase catalytic site of YoeB, induced by interaction with YefM., Complementary biochemical experiments demonstrate that the YoeB toxin has, an in vitro RNase activity that preferentially cleaves at the 3' end of, purine ribonucleotides.

About this Structure

2A6R is a Single protein structure of sequence from Escherichia coli with MG as ligand. Full crystallographic information is available from OCA.

Reference

Conformational change in the catalytic site of the ribonuclease YoeB toxin by YefM antitoxin., Kamada K, Hanaoka F, Mol Cell. 2005 Aug 19;19(4):497-509. PMID:16109374

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