Hemoglobin 3D structures
From Proteopedia
Updated on 24-March-2014
Contents |
Hb α+β
3mkb – Hb α+β – Mako shark
3mjp - Hb α+β - Japanese quail
3mju - pHb α+β - pigeon
3odq, 3kmf, 3dut, 2dn2, 1xxt, 1xz2, 1rq3, 1uiw, 1kd2, 1lfl, 1dke, 1qi8, 1a3n, 2hhd, 2hhe, 1hga, 1hgb, 1hgc, 2hhb, 3hhb, 4hhb, 2hbs, 1a3o, 1hbs, 3p5q - hHb α+β human
2dxm - hHb α+β – neutron
2h35 - hHb α+β – NMR
1fn3, 1nih - hHb α+β+ Ni containing heme
1qsh, 1qsi - hHb α+β+ Mg containing heme
2w6v - hHb α+β+Xe
1xy0, 1xz5, 1xzu, 1xzv, 1y0a, 1y0c, 1y0t, 1y0w, 1y22, 1y2z, 1y31, 1y35, 1y45, 1y46, 1y4b, 1y4f, 1y4g, 1y4p, 1y4q, 1y4r, 1y4v, 1xye, 1xz4, 1xz7, 1y09, 1y0d, 1o1j, 1o1k, 1o1l, 1o1m, 1o1n, 1o1o, 1o1p, 1j7s, 1j7w, 1j7y, 1c7b, 1c7c, 1c7d, 1ch4, 1bzz, 6hbw, 1abw, 1a30, 1a00, 1a01, 1a0u, 1a0z, 1gbu, 1gli, 1hdb, 1dxt, 1dxu, 1dxv, 4mqh, 4mqi - hHb α+β (mutant)
1bz0 - hHb α+β A
1cbl - hHb α+β β4
1bij, 1cls - hHb α+β A crosslinked
1fdh - hHb α+β F
2hbs - hHb α+β S (mutant)
3b75 - hHb α+β + glucose
2d5z, 2d60 - hHb α+β + L35
2w72 - Hb α+β (mutant)+Xe
3ic0, 3ic2, 1qxd, 1qxe, 3r5i - hHb α+β + antisickling agent
1k0y - hHb α+β + sites-linking compound
1g9v, 4l7y - hHb α+β + allosteric effector
1b86, 3wcp - hHb α+β + phosphoglycerate
3ia3 - hHb α+α –Hb stabilizing protein
1z8u, 1y01 - hHb α+α–Hb stabilizing protein (mutant)
3pi8, 3pi9, 3pia, 2qsp, 2qss, 1hda - bHb α+β bovine
3pel, 3gou, 2qls - Hb α+β dog
3ng6, 3nfe, 2aa1 - TnHb α+β Trematomus newnesi
3hyu - GpHb α+β - Guinea pig
3dht - rHb α+β – rat
3gys, 3gqp, 3d4x, 3gqr - Hb α+β– cat
3gdj - Hb α+β – camel
3eu1, 3d1a - gHb α+β – goat
3cy5 - Hb α+β – buffalo
2zlt, 2zlu, 2zlv, 2zlw, 2zlx, 1y8h, 1y8i, 1y8k, 1ns6, 1ibe, 2dhb - hoHb α+β – horse
3k8b - tHb α+β
3eok - Hb α+β – duck
2zfb - Hb α+β - parrot
3a59 - osHb α+β – ostrich
3hrw - mHb α+β – mouse
3bom - trHb α+β - trout
1out -trHb α+β (mutant)
2peg, 2h8d, 2h8f, 1s5x, 1s5y, 1hbh - ErHb α+β - Emerald rockcod
2c0k - Hb α+β – botfly
1s0h - Hb α+β – donkey
1wmu, 1v75 - GgHb α+βD- Geochelone gigantean
1v4w, 1v4x - BtHb α+β Bluefin tuna
1it2 - haHb α+β - hagfish
1fhj - Hb α+β – wolf
1hv4 - BgHb α+β – Bar-headed goose
1cg5 - RsHb α+β – Red stingray
1hbr - cHb α+β D – chicken
3bev – cHb α + MHC I + β-microglobulin
3lhb, 1f5o, 1uc3 - SlHb α+β – Sea lamprey
1hds - Hb α+β S – white-tail deer
4h2l - Hb α+β – deer mouse
2b7h - Hb α+β - crab-eating fox
3lqd - Hb α+β - European hare
3at5, 3at6 – Hb α+β – Podocnemis unifilis
3vre, 3vrg - maHb α+β – mammoth
3wr1 - Hb α+β - cormorant
Hb α+γ-2
4mqj - hHb α+γ-2
4mqk - hHb α+γ-2 (mutant)
hHb variants
2yrs - hHb D Los Angeles α+β
1r1y - hHb α+β Bassett
1bab - hHb α+β Thionville
1hba, 1hbb - hHb α+β Rothschild
1cmy - hHb α+β Ypsilanti + CO
Hb ζ
3w4u - hHb ζ+β
Hb
2ksc, 1mwb – Hb – Synechococcus – NMR
2r50 - Hb – corn
2zwj, 1x3k, 3arj, 3ark, 3arl - TaHb V – Tokunagayusurika akamusi
1x46 – TaHb VII
3ogb, 2w6x, 2w6y – SwHb (mutant) – Sperm whale
3lb1, 3lb2, 3lb3, 3lb4 – dehaloperoxidase AoHb+inhibitor – Amphitrite ornate
3k3u - dehaloperoxidase AoHb (mutant)
2xyk – 2-on-2 Hb – Agrobacterium tumefaciens
2hz1, 1rtx – SyHb – Synechocystis
2hz3 – SyHb (mutant)
2gnv, 2gnw – rHb (mutant) – rice
1d8u – rHb
2bmm – Hb – Thermobifida fusca
2bk9 – DmHb - Drosophila melanogaster
1kfr, 1h97 – Hb – Paramphistomum epiclitum
1gcv – MgHb - Mustelus griseus
1vhb – VsHb – Vitreoscilla stercoraria
4vhb – VsHb + SCN
1hlb, 1hlm – Hb – Caudina arenicola
2hbg - GdHb – Glycera dibranchiata
3qqq – Hb non-symbiotic – Poison peach
3qqr – Hb non-legume – Parasponia andersonii
Mini Hb
2xkg, 2xkh, 2xki, 2vyy, 2vyz, 4f68, 4f69, 4f6b, 4f6d, 4f6f, 4f6g, 4f6i, 4f6j – ClMiHb (mutant) – Cerebratulus lacteus
4avd – ClMiHb + CO
4ave – ClMiHb
Giant Hb
1x9f – GiHb+CO – Lumbricus terrestris
2zs0, 2zs1, 2zfo, 2d2m, 2d2n – GiHb+O2 – Beard worm
1yhu – GiHb+O2 – Tube worm
Truncated Hb
1dlw – TrHb – Paramecium caudatum
2bkm - TrHb +O2 - Geobacillus stearothermophilus
1idr – MtTrHb + O2 - Mycobacterium tuberculosis
2ig3 – TrHb III +CN – Campylobacter jejuni
1ux8 – TrHb+CN – Bacillus subtilis
1rte, 1s56 – MtTrHb + CN
1s61 – MtTrHb+ butyl-isocyanide
1uvx, 1uvy – TrHb + CN – Chlamydomonas moewusii
3aq5 – TpHb+ O2 – Tetrahymena pyriformis
3aq6 – TpHb III
3aq7, 3aq8 - TpHb III (mutant
MetHb α+β
3gqg - roMetHb α+β
3dhr - pMetHb α+β
3hf4 - rMetHb α+β
2ri4 - gMetHb α+β
2r1h - trMetHb α+β
1ns9, 2mhb - hoMetHb α+β
2qu0 - MetHb α+β – sheep
2pgh - MetHb α+β - pig
3bj1, 3bj2, 3bj3, 1xq5 - MetHb α+β – yellow perch
2hz2 – SyMetHb (mutant)
1dtm, 1duo - SwMdetHb (mutant) + methylimidazole
1duk - SwMdetHb
1jy7, 1bz1 - hMetHb α+β
1vwt - hMetHb α+β (mutant)
1c40 - BgMetHb α+β
1moh - LpMetHb + H2S - Lucina pectinata
1flp, 3pi1, 3pi2, 3pi3, 3pi4 – LpMetHb
LegHb
1lh1, 1lh2, 1lh3, 1lh5, 1lh6, 1lh7, 2lh1, 2lh2, 2lh3, 2lh5, 2lh6, 2lh7, 1gdj – LlLegHb – Lupinus luteus
2gdm – LlLegHb + O2
1gdi – LlLegHb + CO
1gdl – LlLegHb + NO
1gdk – LlLegHb + isoquinoline
1bin – SoLegHb – Soybean
1fsl – SoLegHb + nicotinate
Hb α+β + CO
3gkv - roHb α+β + CO – rockcod
3d1k, 1la6, 1t1n - TnHb α+β + CO
3d17, 1yzi, 1j3y, 1j3z, 1j40, 1j41, 1ljw, 1ird, 1bbb, 1hco, 2hco, 2dn3, 3s65 - hHb α+β + CO
1mko - hHb α+β A + CO
1cbm - hHb α+β β4 + CO
1nej - hHb α+β S + CO
1m9p - hHb α+β C + CO
1coh - - hHb α+β Co containing heme + CO
1hab, 1hac, 1sdk, 1sdl - hHb α+β A crosslinked + CO
3nl7, 3nml, 3nmm, 1yvq, 1yvt, 1yff, 1aj9, 1rvw, 3qjb, 3qjc, 3qjd, 3qje, 3s66, 4mqc, 4mqg - hHb α+β (mutant) + CO
1k1k - hHb α+β C (mutant) + CO
1r1x - hHb α+β Bassett (mutant) + CO
1i3d - hHb α+β Bart’s + CO
1a9w - hHb α+β Gower II + CO
1iwh - hoHb α+β +CO
2d5x - hoHb α+β + CO + L35
3hxn - hHb α+β +CO+inositol hexakisphosphate
1jeb – hHb/mHb α+β +CO
2z6n - GgHb α+β +CO
1v4u - BtHb α+β
3a9m, 3a5a, 3a5b, 3a5g – TaHb V+CO
1it3 - haHb α+β +CO
1fsx, 1g08, 1g09, 1g0a, 1g0b - bHb α+β +CO
1gcw – MgHb + CO
1f5p – SlHb V + CO
1vre, 1vrf - GdHb IV+ CO – NMR
1hbg, 1hbg – GdHb + CO
1cg8 - RsHb α+β + CO
1spg - Hb α+β + CO - Spot croaker
1ouu - trHb α+β (mutant) + CO
1pbx - ErHb α+β+ CO
3vrf - maHb α+β + CO
4esa - Hb α+β + CO – Eleginops maclovinus
4iro – TbHb α+β + CO – Trematomus bernacchii
Hb α+β + O2
3fs4 - osHb α+β + O2
2r80 - pHb α+β +O2
2rao - Hb α+β + O2 – rabbit
2vyw – Hb+O2 – Fasciola Hepatica
2qmb - tHb α+β +O2 - turkey
3a0g - GpHb α+β + O2
3fh9 - Hb α+β +O2 – Indian flying fox
3bcq - Hb α+β +O2 – Brycon cephalus
2olp - LpHb+O2
3ciu - bHb α+β +O+glycosylation
2dn1, 1lfq, 1lft, 1lfv, 1lfy, 1lfz, 1gzx, 1thb, 1hho – hHb α+β +O2
1yeo, 1yh9, 1yhe, 1yhr, 1yie, 1yih, 1yen, 1yeq, 1yeu, 1yev, 1yg5, 1ygd, 1ygf, 1y8w, 1ydz, 1ye0, 1ye1, 1ye2, 1y7z, 1y83, 1y85, 1y5f, 1y5j, 1y5k, 1y7c, 1y7d, 1y7g, 1gbv - hHb α+β (mutant) + O2
1faw - Hb α+β +O2 – Grayleg goose
1a4f – BgHb α+β +O2
1qpw - pHb α+β +O2 - pig
1v07 – ClMiHb (mutant) + O2
1kr7 – ClMiHb + O2
1ash – Hb + O2 – Pig roundworm
3pt7 - LpHb α+β +O2
Hb α+β + CN
2g3h – DmHb (mutant)+CN
2oif - Hb+CN – barley
1shr, 1si4 - hHb α+β + CN
2hbc, 2hbd, 2hbe, 2hbf - hHb α+β A + isocyanide compound
1nqp - hHb α+β E + CN
1o1i, 1aby - hHb α+β (mutant)+CN
1i3e - hMetHb α+β Bart’s + N3
1s69 – SyHb + CN
1s6a – SyHb + N3
1jl6, 1jf4 – GdHb IV+ CN
1jl7, 1jf3 – GdHb III + CN
1dly – Hb + CN – Chlamydomonas eugametos
1b0b, 1ebt, 3pt8 – LpHb + CN
4vhb – VsHb + SCN
3vhb – VsHb + imidazole
2vhb – VsHb + N3
1ebc – SwMdetHb + CN
1ith – Hb + CN – Urechis caupo
2lhb – slHb V + CN
Hb α+β + NO2
3d7o, 3onz, 3oo4, 3oo5 - hHb α+β+NO2
1buw - hHb α+β+ S-nitroso-nitrosyl
1rqa - hHb α+β (mutant) + NO
1rps, 1rq4 - hHb α+β+NO
Hb + NO
4g51 – TbHb α+β + NO
Dimeric Hb (Globin-1)
2z85, 2aur, 2av3, 1jzk, 1jzm, 4hbi, 6hbi, 2grf, 3uhk, 3uhn, 3uhq, 3uhr, 3uhs, 3uht, 3uhu, 3uhv, 3uhw, 3uhx, 3uhy, 3uhz, 3ui0, 3ugy- AcHb (mutant) - Ark clam
4sdh - AcHb α+β
3g46, 3g4q, 3g4r, 3g4u, 3g4v, 3g4w, 3g4y, 3g52, 3g53, 1sct, 3sdh, 1nxf, 3uhd, 1nw1, 1nwn – AcHb +CO
2r4w, 2r4x, 2r4y, 2r4z, 2z8a, 2grh, 2auo, 2aup, 2auq, 2av0, 1jzl, 1jwn, 5hbi, 7hbi, 1grz, 3ugz, 3uh3, 3uh5, 3uh6, 3uh7, 3uhb, 3uhc, 3uhd, 3uhe, 3uhg, 3uhh, 3uhi – AcHb (mutant) + CO
1hbi - AcHb +O2
3zhw – EcHb - Escherichia coli
Tetrameric Hb (Globin-2)
4hrt – globin-2 α+ Hb β - Inequivalve Ark
Hb complex with protein
3ovu – hHb α + α-Hb-stabilizing protein + iron-regulated surface determinant protein H
3szk, 3s48 - hHb α + iron-regulated surface determinant protein H
4fc3, 4ij2 - hHb α+β + iron-regulated surface determinant protein H
4f4o - pHb α+β + haptoglobin
Flavohemoglobin
4g1v – yFHb - yeast
4g1b – yFHb + econazole
1cqx – CnFhb – Cupriavidus necator
1gvh – EcFhb
3ozu – CnFhb + miconazole
3ozv – CnFhb + econazole
3ozw – CnFhb + ketoconazole
4eh1 – Fhb + FAD – Vibrio cholerae
