Ribosomal protein S10
From Proteopedia
Ribosomal protein S10 (RPS10) is one of the 22 proteins which belong to the small subunit of the bacterial ribosome. It functions in binding tRNA to the ribosome and operates as a transcriptional elongation factor. The images at the left and at the right correspond to one representative RPS10, i.e. the crystal structure of Ribosomal protein S10 from Thermus thermophilus (2zm6, chain J).
3D Structures of Ribosomal protein S10
Updated on 17-October-2013
S10 + Protein
3imq, 3d3b, 3d3c - EcRPS10 +NUSB - Escherichia coli
3r2c, 3r2d – RPS10 + NUSB + RNA – Aquifex aeolicus
S10 in small ribosomal subunit
2zm6, 1n36, 1j5e, 3oto - TtRPS10 in 30S ribosomal subunit+THX+16S RRNA – Thermus thermophilus
2vqe, 2vqf, 2uuc, 2e5l, 2uu9, 2uua, 2uub, 3pyn, 3pyq, 3pys, 3pyu - TtRPS10 in 30S ribosomal subunit+16S RRNA+RNA fragment
3kc4 – EcRPS10 in 30S ribosomal subunit
3i1m, 3i1o, 3df1, 3df3, 2vho, 2vhp, 2avy, 2aw7, 1pnx, 3or9, 3ora - EcRPS10 in 30S ribosomal subunit+16S RRNA
1i94, 1fka, 3uxs, 3uxt, 4dr1 - TtRPS10 in 30S ribosomal subunit+16S RRNA
4duy, 4duz, 4dv0, 4dv1, 4dv2, 4dv3, 4dv4, 4dv5, 4dv6, 4dv7 - TtRPS10 in 30S ribosomal subunit+16S RRNA (mutant)
4dr4, 4b3m, 4b3r, 4b3s, 4b3t – TtRPS10 in 30S ribosomal subunit+16S RRNA + mRNA
1p87, 1p6g - EcRPS10 in 30S ribosomal subunit+16S RRNA – Cryo-EM
3bbn - RPS10 in 30S ribosomal subunit+16S RRNA – Cryo-EM – spinach
S10 in small + large ribosomal subunit
1ml5 - EcRPS10 in 30S ribosomal subunit+50S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA - EM
S10 in small ribosomal subunit+ chain release factor (RF)
3mr8, 3ms0 – TtRPS10 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+mRNA+16S RRNA
3d5a, 3d5c - TtRPS10 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+E-site tRNA+mRNA +16S RRNA
3zvo – TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Met +mRNA +16S RRNA+chain release factor 3
2b64 - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 1
2b9m - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 2
2x9r, 2x9t, 2wh1, 2wh3 - TtRPS10 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+mRNA +16S RRNA
3f1e, 3f1g - TtRPS10 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA
3uoq – EcRPS10 + 16S RRNA + mRNA + chain release factor 3
4kfh, 4kfk - TtRPS10 in 30S ribosomal subunit+16S RRNA+ RF-2 + mRNA+ P-site tRNA fMet
S10 in small ribosomal subunit+tRNA+mRNA
2hgi - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet
4l6k, 4l6m - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA
2hgp - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA
3t1h, 3t1y - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Lys +mRNA
3tvf, 3tvg, 3uyd, 3uyf - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA
3zn7, 3znd - TtRPS10 in 30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA
3uz6, 3uz7, 3uzg, 3uzi - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA
2i2p, 2i2u - EcRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA
2hgr, 3v6u, 3v6v, 4ej9, 4eja - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA
1yl4 – TtRPS10 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator
1pns - EcRPS10 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA
3j0u, 3j0v, 3j0x, 3j0z, 3j10, 3j20 – EcRPS10 in 30S ribosomal subunit+ A-site tRNA + P-site tRNA +16S RRNA+mRNA – Cryo-EM
3j13 – EcRPS10 in 30S ribosomal subunit+ P-site tRNA +16S RRNA+mRNA – Cryo-EM
1xnq, 1xnr - TtRPS10 in 30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA
4gkj, 4gkk - TtRPS10 in 30S ribosomal subunit +16S RRNA +THX + mRNA + tRNA Met
4jv5, 4jya, 4k0k, 4k0l - TtRPS10 in 30S ribosomal subunit +16S RRNA +THX + mRNA + ASL-tRNA
S10 in small ribosomal subunit+A-site tRNA
2uxd, 2uxc - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S RRNA
1n32, 1n33 - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S RRNA
1n34 - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA fragment +16S RRNA
1xmo, 1xmq - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S RRNA
2uxb - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S RRNA
S10 in small ribosomal subunit+P-site tRNA
3i8g - TtRPS10 in 30S ribosomal subunit+P-site tRNA+mRNA +16S RRNA
3i8h, 3i9b, 3i9d - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA
1ibk - TtRPS10 in 30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA
2wwl - EcRPS10 in 30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA - Escherichia coli
3i1q - EcRPS10 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA
3i1s, 3i1z, 3i21 - EcRPS10 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA
S10 in small ribosomal subunit+A-site tRNA+P-site tRNA
1ibl, 1ibm - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S RRNAv
S10 in small ribosomal subunit+P-site tRNA+E-site tRNA
2ow8 - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA+mRNA +16S RRNA
2b9o - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA
2qnh - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA
2wdg, 2wdh, 2wdk, 2wdm - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe
S10 in small ribosomal subunit+A-site tRNA+P-site tRNA+E-site tRNA
2gy9, 2gyb - EcRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA – Cryo-EM
1jgo, 1jgp, 1jgq, 1gix - TtRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA
4k0p - TtRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA
3e1a, 3e1c - EcRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA
S10 in small ribosomal subunit + antibiotics
1i95, 1i97,2hhh, 2f4v, 3oge, 3ogy, 3ohc, 3ohd, 3ohy, 3oi0, 3oi2, 3oi4, 4dr2, 4dr3 - TtRPS10 in 30S ribosomal subunit+16S RRNA+antibiotic
1hnw, 1hnx, 1hnz, 1fjg, 4aqy, 4dr5, 4dr6, 4dr7, 4khp - TtRPS10 in 30S ribosomal subunit+16S RRNA+mRNA fragment+antibiotic
2qbb, 2qb9, 1vs5, 1vs7, 2qan, 2qal, 2qou, 2qow, 2qoy, 2qp0, 2z4k, 2z4m, 3oaq, 3oar, 3ofa, 3ofb, 3ofo, 3ofp, 3ofx, 3ofy - EcRPS10 in 30S ribosomal subunit+16S RRNA+antibiotic
3sfs – EcRPS10 in 30S ribosomal subunit+16S RRNA+ mRNA + RF-3 + antibiotic
4gaq, 4gas – EcRPS10 in 30S ribosomal subunit+16S RRNA+ mRNA + antibiotic
2j00, 2j02 - TtRPS10 in 30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA
3knj, 3knh, 3knj, 3knn - TtRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+ antibiotics
3uz3, 3uz4 - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA + paromomycin
4g5k, 4g5m, 4g5t, 4g5v - TtRPS10 in 30S ribosomal subunit+16S RRNA + tRNA fMet + mRNA + antibiotics
3uzl, 3uzm - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA + paromomycin
S10 in small ribosomal subunit + ribosome recycling factor
2qbd, 2qbf – EcRPS10 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor
3r8n, 3r8o, 4gd1, 4gd2]] – EcRPS3 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor + mRNA + tRNA
2qbh, 2qbj - EcRPS10 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin
2v46, 2v48 - TtRPS10 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet
S10 in small ribosomal subunit + elongation factor (EF)
2wri, 2wrk - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA+elongation factor G
2wrn, 2wrq - TtRPS10 in 30S ribosomal subunit+THX+A-site tRNA+mRNA +16S RRNA+elongation factor TU-4
3fic - TtRPS10 in 30S ribosomal subunit+THX+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A
4abr – TtRPS10 in 30S ribosomal subunit+THX + E/P-site tRNA fMet +mRNA codon+16S RRNA+elongation factor TU
3izv – EcRPS10 in 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+elongation factor TU
3j18 - EcRPS10 in 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+ mRNA + SSRA-binding protein + formyl-Met specific initiator tRNA + elongation factor G – Cryo-EM
3izw – EcRPS10 in 30S ribosomal subunit+A-site tRNA Phe +mRNA +16S RRNA+elongation factor TU
2y0u, 2y0w, 2y0y, 2y10, 2y12, 2y14, 2y16, 2y18 - TtRPS10 in 30S subunit+THX+A-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU
3fih - EcRPS10 in 30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU
3huw, 3huy - TtRPS10 in 30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+elongation factor P
4b8f, 4b8h - TtRPS10 in 30S ribosomal subunit+THX+RNA+mRNA +16S RRNA+EF-G
4btc, 4kdg, 4kdj - TtRPS10 in 30S ribosomal subunit+THX+RNA +16S RRNA+EF-G
4juw - TtRPS10 in 30S ribosomal subunit+THX+ tRNA Phe +16S RRNA + mRNA +EF-G
4kbt, 4kbv, 4kcy, 4kd0, 4kd8, 4kda - TtRPS10 in 30S ribosomal subunit+THX+ tRNA Met +16S RRNA + mRNA + viomycin + EF-G
4kiy, 4kj0, 4kj2, 4kj4, 4kj6, 4kj8, 4kja, 4kjc - EcRPS10 in 30S ribosomal subunit +16S RRNA + viomycin + EF-G
S10 in small ribosomal subunit + translation initiation factor
1i96 - TtRPS10 in 30S ribosomal subunit+THX+IF3+16S RRNA
1hr0 - TtRPS10 in 30S ribosomal subunit+THX+IF+16S RRNA
S10 in small ribosomal subunit + various proteins
3kiq, 3kis, 3kiu, 3kix - TtRPS10 in 30S ribosomal subunit+toxin RelE+16S RRNA
4dh9, 4dhb - TtRPS10 in 30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ
1voq, 1vos, 1vov, 1vox, 1voz - EcRPS10 in 30S ribosomal subunit+protein Y+16S RRNA
3j36 - EcRPS10 in 30S ribosomal subunit+ tetracycline resistance protein +16S RRNA + mRNA + P-tRNA – Cryo-EM
2xfz, 2xg1 - TtRPS10 in 30S ribosomal subunit+tRNA Phe+mRNA+colicin E3+16S RRNA
3j00 – EcRPS10 + 16S RRNA + FTSQ + apolipoprotein A-I
2ykr – EcRPS10 + 16S RRNA + GMPPNP + GTPase RSGA
4a2i – EcRPS10 + 16S RRNA + GTPase RSGA – Cryo EM
4adv - EcRPS10 + 16S RRNA + methyltransferase – Cryo EM
3v22, 3v24, 3v26, 3v28 – TtRPS10 in 30S ribosomal subunit +16S RRNA +THX + modulation factor
3v2c, 3v2e – TtRPS10 in 30S ribosomal subunit +16S RRNA +THX + ribosome-associated inhibitor
S10 in small 40S ribosomal subunit
3iz6 - RPS10 in 40S ribosomal subunit+RACK1 – wheat – Cryo EM
3izb - yRPS10 in 40S ribosomal subunit+ RACK1 – yeast - Cryo-EM
3u5c, 3u5g - yRPS10 in 40S ribosomal subunit+ RACK1 + suppressor protein SMT1
3j3a - RPS10 in 40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – human – Cryo-EM
4kzx - rRPS10 in 40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM
4kzy - rRPS10 in 40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM
4kzz - rRPS10 in 40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM
2xzm, 2xzn - RPS10 in 40S subunit+18S RRNA+RACK1 - Tetrahymena thermophila
