Structural highlights
4ndp is a 2 chain structure with sequence from Azotobacter vinelandii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
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Ligands: | , , , , , |
Related: | 2ogx, 4f6t, 4ndo, 4ndq, 4ndr |
Resources: | FirstGlance, OCA, RCSB, PDBsum |
Publication Abstract from PubMed
The molybdenum storage protein (MoSto) can store more than 100 Mo or W atoms as discrete polyoxometalate (POM) clusters. Here, we describe the three POM cluster sites along the threefold axis of the protein complex based on four X-ray structures with slightly different polyoxomolybdate compositions between 1.35 and 2A resolution. In contrast to the Moalpha-out binding site occupied by an Mo3 cluster, the Moalpha-in and Mobeta binding sites contain rather weak and non-uniform electron density for the Mo atoms (but clearly identifiable by anomalous data), suggesting the presence of POM cluster ensembles and/or degradation products of larger aggregates. The "Moalpha-in cluster ensemble" was interpreted as an antiprism-like Mo6 species superimposed with an Mo7 pyramide and the "Mobeta cluster ensemble" as an Mo13 cluster (present mostly in a degraded form) composed of a pyramidal Mo7 and a Mo3 building block linked by three spatially separated MoOx units. Inside the ball-shaped Mo13 cluster sits an occluded central atom, perhaps a metal ion. POM cluster formation at the Moalpha-in and Mobeta sites appears to be driven by filtering out and binding/protecting self-assembled transient species complementary to the protein template.
Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.,Poppe J, Warkentin E, Demmer U, Kowalewski B, Dierks T, Schneider K, Ermler U J Inorg Biochem. 2014 Sep;138:122-8. doi: 10.1016/j.jinorgbio.2014.05.009. Epub, 2014 May 28. PMID:24945101[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Poppe J, Warkentin E, Demmer U, Kowalewski B, Dierks T, Schneider K, Ermler U. Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein. J Inorg Biochem. 2014 Sep;138:122-8. doi: 10.1016/j.jinorgbio.2014.05.009. Epub, 2014 May 28. PMID:24945101 doi:http://dx.doi.org/10.1016/j.jinorgbio.2014.05.009