User:Shai Biran/Practice Proteopedia tutorial shai1

From Proteopedia

proteopedia linkproteopedia link

Contents 1 HOW TO EDIT A PAGE 2 Your Heading Here (maybe something like 'Structure') 3 Next 4 References

HOW TO EDIT A PAGE

In your second window Go to http://proteopedia.org .

Use the search box to get to your assigned Sandbox page. You will need to log in to edit the page. Log in with a guest account. On your assigned Sandbox page, click on “edit this page” at the top of the page. Then scroll down and click the “save page” button. This will ‘create’ and save your Sandbox page for further editing.

Your page should look like this: ↓↓↓↓↓↓↓↓↓↓↓↓

Your Heading Here (maybe something like 'Structure')

spinqualitylabelsall models Caption for this structure Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image This is a default text for your page Practice Proteopedia tutorial shai1. Click above on edit this page to modify. Be careful with the < and > signs. You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue. Contents 1 Function 2 Disease 3 Relevance 4 Structural highlights Function Disease Relevance Structural highlights This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.

Next

• Open a new browser window and navigate to the page “Sandbox” (with no additional number) in Proteopedia.
• Click on the link GFP Test page to reach an example page on Green Fluorescent Protein. We will recreate this page in Proteopedia as an example.


keep this page open throughout the workshop.

Previous page (1)

Next page (3)

References

1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644