| Structural highlights
4aoq is a 6 chain structure with sequence from Bos taurus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
| | Ligands: | , |
| Related: | 1aq7, 1auj, 1az8, 1bju, 1bjv, 1btp, 1btw, 1btx, 1bty, 1btz, 1c1n, 1c1o, 1c1p, 1c1q, 1c1r, 1c1s, 1c1t, 1c2d, 1c2e, 1c2f, 1c2g, 1c2h, 1c2i, 1c2j, 1c2k, 1c2l, 1c2m, 1c5p, 1c5q, 1c5r, 1c5s, 1c5t, 1c5u, 1c5v, 1c9t, 1ce5, 1cu7, 1cu8, 1cu9, 1d6r, 1eb2, 1ejm, 1ezx, 1f0t, 1f0u, 1f2s, 1g36, 1g3b, 1g3c, 1g3d, 1g3e, 1g9i, 1gbt, 1ghz, 1gi0, 1gi1, 1gi2, 1gi3, 1gi4, 1gi5, 1gi6, 1gj6, 1hj9, 1j8a, 1jir, 1jrs, 1jrt, 1k1i, 1k1j, 1k1l, 1k1m, 1k1n, 1k1o, 1k1p, 1lqe, 1max, 1may, 1mts, 1mtu, 1mtv, 1mtw, 1n6x, 1n6y, 1nc6, 1ntp, 1o2h, 1o2i, 1o2j, 1o2k, 1o2l, 1o2m, 1o2n, 1o2o, 1o2p, 1o2q, 1o2r, 1o2s, 1o2t, 1o2u, 1o2v, 1o2w, 1o2x, 1o2y, 1o2z, 1o30, 1o31, 1o32, 1o33, 1o34, 1o35, 1o36, 1o37, 1o38, 1o39, 1o3a, 1o3b, 1o3c, 1o3d, 1o3e, 1o3f, 1o3g, 1o3h, 1o3i, 1o3j, 1o3k, 1o3l, 1o3m, 1o3n, 1o3o, 1oph, 1ox1, 1oyq, 1p2i, 1p2j, 1p2k, 1ppc, 1ppe, 1pph, 1qa0, 1qb1, 1qb6, 1qb9, 1qbn, 1qbo, 1qcp, 1ql7, 1ql8, 1rxp, 1s0q, 1s0r, 1sbw, 1sfi, 1smf, 1tab, 1taw, 1tgb, 1tgc, 1tgn, 1tgs, 1tgt, 1tio, 1tld, 1tng, 1tnh, 1tni, 1tnj, 1tnk, 1tnl, 1tpa, 1tpo, 1tpp, 1tps, 1tx7, 1tx8, 1tyn, 1utn, 1uto, 1utp, 1utq, 1v2j, 1v2k, 1v2l, 1v2m, 1v2n, 1v2o, 1v2p, 1v2q, 1v2r, 1v2s, 1v2t, 1v2u, 1v2v, 1v2w, 1xuf, 1xug, 1xuh, 1xui, 1xuj, 1xuk, 1y3u, 1y3v, 1y3w, 1y3x, 1y3y, 1y59, 1y5a, 1y5b, 1y5u, 1yp9, 1yyy, 1zr0, 1zzz, 2a7h, 2ah4, 2ayw, 2blv, 2blw, 2btc, 2by5, 2by6, 2by7, 2by8, 2by9, 2bya, 2bza, 2cmy, 2fi3, 2fi4, 2fi5, 2ftl, 2ftm, 2fx4, 2fx6, 2j9n, 2ptc, 2ptn, 2tga, 2tgd, 2tgp, 2tgt, 2tio, 2tld, 2tpi, 2uuy, 2xtt, 3btd, 3bte, 3btf, 3btg, 3bth, 3btk, 3btm, 3btq, 3btt, 3btw, 3ptb, 3ptn, 3tpi, 4ab8, 4ab9, 4aba, 4abb, 4abd, 4abe, 4abf, 4abg, 4abh, 4abi, 4abj, 4tpi, 5ptp, 4aor |
| Activity: | Trypsin, with EC number 3.4.21.4 |
| Resources: | FirstGlance, OCA, RCSB, PDBsum |
Publication Abstract from PubMed
In recent decades, several canonical serine protease inhibitor families have been classified and characterized. In contrast to most trypsin inhibitors, those from garden four o'clock (Mirabilis jalapa) and spinach (Spinacia oleracea) do not share sequence similarity and have been proposed to form the new Mirabilis serine protease inhibitor family. These 30-40-amino-acid inhibitors possess a defined disulfide-bridge topology and belong to the cystine-knot miniproteins (knottins). To date, no atomic structure of this inhibitor family has been solved. Here, the first structure of S. oleracea trypsin inhibitor III (SOTI-III), in complex with bovine pancreatic trypsin, is reported. The inhibitor was synthesized by solid-phase peptide synthesis on a multi-milligram scale and was assayed to test its inhibitory activity and binding properties. The structure confirmed the proposed cystine-bridge topology. The structural features of SOTI-III suggest that it belongs to a new canonical serine protease inhibitor family with promising properties for use in protein-engineering and medical applications.
Structural characterization of Spinacia oleracea trypsin inhibitor III (SOTI-III).,Glotzbach B, Schmelz S, Reinwarth M, Christmann A, Heinz DW, Kolmar H Acta Crystallogr D Biol Crystallogr. 2013 Jan;69(Pt 1):114-20. doi:, 10.1107/S0907444912043880. Epub 2012 Dec 20. PMID:23275169[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Glotzbach B, Schmelz S, Reinwarth M, Christmann A, Heinz DW, Kolmar H. Structural characterization of Spinacia oleracea trypsin inhibitor III (SOTI-III). Acta Crystallogr D Biol Crystallogr. 2013 Jan;69(Pt 1):114-20. doi:, 10.1107/S0907444912043880. Epub 2012 Dec 20. PMID:23275169 doi:http://dx.doi.org/10.1107/S0907444912043880
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