1s1d
From Proteopedia
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| , resolution 1.60Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , and | ||||||
| Gene: | SHAPY (Homo sapiens) | ||||||
| Activity: | Apyrase, with EC number 3.6.1.5 | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Structure and protein design of human apyrase
Overview
Hematophagous arthropods secrete a salivary apyrase that inhibits platelet activation by catabolizing ADP released from damaged tissues and blood cells. We report the X-ray crystal structures of a human enzyme of the soluble apyrase family in its apo state and bound to a substrate analog. The structures reveal a nucleotide binding domain comprising a five-blade beta propeller, binding determinants of the substrate and the active site, and an unusual calcium binding site with a potential regulatory function. Using a comparative structural biology approach, we were able to redesign the human apyrase so as to enhance its ADPase activity by more than 100-fold. The engineered enzyme is a potent inhibitor of platelet aggregation and may serve as the basis for the development of a new class of antithrombotic agents.
About this Structure
1S1D is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Structure and protein design of a human platelet function inhibitor., Dai J, Liu J, Deng Y, Smith TM, Lu M, Cell. 2004 Mar 5;116(5):649-59. PMID:15006348
Page seeded by OCA on Thu Mar 20 13:59:10 2008
Categories: Apyrase | Homo sapiens | Single protein | Dai, J. | Deng, Y. | Liu, J. | Lu, M. | Smith, T M. | ACT | CA | GP2 | SO4 | TRS | Adpase | Calcium-binding protein | Five-blade beta propeller | Nucleotide-binding motif
