Structural highlights
2cio is a 2 chain structure with sequence from Carica papaya and Trypanosoma (trypanozoon) brucei. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
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| Ligands: | , |
| NonStd Res: | |
| Related: | 1bp4, 1bqi, 1cvz, 1eff, 1khp, 1khq, 1pad, 1pe6, 1pip, 1pop, 1ppd, 1ppn, 1ppp, 1stf, 2pad, 4pad, 5pad, 6pad, 9pap |
| Activity: | Papain, with EC number 3.4.22.2 |
| Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum |
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Attempts to cocrystallize the cysteine protease papain derived from the latex of Carica papaya with an inhibitor of cysteine proteases (ICP) from Trypanosoma brucei were unsuccessful. However, crystals of papain that diffracted to higher resolution, 1.5 A, than other crystals of this archetypal cysteine protease were obtained, so the analysis was continued. Surprisingly, the substrate-binding cleft was occupied by two short peptide fragments which have been assigned as remnants of ICP. Comparisons reveal that these peptides bind in the active site in a manner similar to that of the human cysteine protease inhibitor stefin B when it is complexed to papain. The assignment of the fragment sequences is consistent with the specificity of the protease.
High-resolution complex of papain with remnants of a cysteine protease inhibitor derived from Trypanosoma brucei.,Alphey MS, Hunter WN Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Jun 1;62(Pt, 6):504-8. Epub 2006 May 5. PMID:16754967[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Alphey MS, Hunter WN. High-resolution complex of papain with remnants of a cysteine protease inhibitor derived from Trypanosoma brucei. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Jun 1;62(Pt, 6):504-8. Epub 2006 May 5. PMID:16754967 doi:10.1107/S1744309106014849
